Id Trinity | FTRINITY_DN55536_c1_g5_i1 |
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Name Transcript | Ll_transcript_74680 |
Sequence | CATTACTTGAGTTTATAATCACTTTGTGGAAGCACAAATACCACACACTGAAAGATAGAAGCAAAAATATGAGGATTGATTATTTGAAGCACAAGAGTGT TATCTTAAAATTGGTGGTTATCACATTCTTCTTTGGATTTGCTTTGAAACTTATCTTCTTTCATTCCCTACCTCAGAAAACTTTGCTAGTTATGGAACAC CCTTTTCATGAGAAAACAACCAATGTAACAGAACAACAAAACACACTTGTTTCAGAACATGTTCCTGAAATAGAAGATCAATTGTCTTACATAAATACAG AGAAATGTGATTACTTAAGTGGGGATTGGGTCCCTAATCCAAAGGGACCACTTTATAGTGAAGATTGCAATCACATTGAACCTTATCAAAATTGCTTGAA GAATGGAAGGCCAGATAGAGAATTTTTGTATTGGAAATGGGCTCCTACAAACTGTGATTTACCTTCATTTGATCCACATAAGTTTCTCAATGCAATGCGC AATAAAGCATGGGCACTTATTGGTGACTCCATAACTCGGAACCATGTCAAATCCTTGATGTGCATGCTTTCTACGGTGGGGCAACCTATTGTATTATATG AGGAGAAAGGATTCAAGTCCAAAACCTGGCACTTCCCTTCATACAACTTCACTCTATCAGTTATTTGGTCACCATTTCTTGTAGAAGCTGATATTATTGA AGACATTAATGGTGTTCCAAATTCTGAAATTGAGTTACATCTTGACAAATTAAGTAGTAAATGGAAAAACCAATTCATGAACTTTGATTACATTATTCTC TCATGTGGGAAATGGTTTCTAAGATCAGCAATCTACTATGAAAATAACACTATATTGGGGTGTCACTCTTGCCCTAAAAGGAACCTCATAGAGTTAGAAT TTACCTTTGCTTATAGAAAAGCCATCAAATTTGTATTGAATTCTATGGTTTCTTCAAACCACAAAGGCATGATTTTTTATAGAACATTCACTCCAGATCA TTTTGAAAATGGTGAATGGTCTAATGGAGGAACATGCAAGAGAACAAAACCAGTTAAGGAAGGTGAAATGGAGATTAAGTACTTGAATAAGATGCTTCGT GATATAGAGTTGAAGGAGGTTGGAAATGCAGTTATTGAAGCTTCAAGAAATGGTGTGAATCTTAGGGTTGTTGATTTTGTACCACTTTCACTTTTGAGAC CAGATGGACATCCTGGTCCATATAGAGAGTTTCATCCATTTGATAAGAGAGACAAAAATGGTGAAGTTCAAAATGATTGTTTGCATTGGTGTTTGCCTGG GCCAATAGATTCTTGGAATGATATATTAATGGAGATGGTTGTCAATGGATGAGAAAACCGGTTAGAGTCTCTTTACGAGTTGGATTTTGAAGGAAAAGAA GGGAAGGCTTCTGATTCTTAATAGGTGAGAAAATCGGTTAATTAAATCAGTTCCTTTATGTTACGATTCTTTGTGTTCTTTCATATGTACGATGGAGATA AGAGATAAACAAATTCTATGATGAAGAAAACGGGTTTTAAATTGAATGGGAACGTTGGTGAATAGCACGCTGATATTTGTGTATATATATTAAATCATTA TATAGTTGCCGAGTTTGTAGTGTCATAAATATAAAATGAGAATTGAAGTGCTTGCATGCACATGTGAAGACTTTTTGGGCCATTTGAGCAAATTTTCTTT TAAAAAAAATATGTACCTTTGGATTCTATTATTGTTTTGTAACATTAGTTAATTATCCTGGTTGATATTGACAAATATGAACAAGCCG BLAST |
Tissue | flowers |
Gene name | LI_gene_52280; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_74680
Blastp | Protein trichome birefringence-like 23 from Arabidopsis with 49.88% of identity |
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Blastx | Protein trichome birefringence-like 23 from Arabidopsis with 53.23% of identity |
Eggnog | expressed protein(ENOG410XSGA) |
Kegg | Link to kegg annotations (AT4G11090) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019423687.1) |
Pfam | PMR5 N terminal Domain (PF14416.5) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |