| Id Trinity | FTRINITY_DN55537_c3_g1_i12 |
|---|---|
| Name Transcript | Ll_transcript_75649 |
| Sequence | GCTCAAGCACCACCCCTTATCTCATGGCCCCACAATCTTTTTTCATTTCTACCAATATCATCGCACCATAAAGCCTCACCCTTTTCATCCCCATTTCCTC ACACACCATCGTTACTCCTCTGAATATAAATCCATCAAACGAATAAACGCTATGGACAAATAACACAAAATCTTCATCTTCTATTAACATCTTTCTTCAA TTCAATGGCTCTTATATCTCTCTCACTTCTTCCCTCTCTTCTTCCACACTCTTCTTCTTCTTCTTCTTCTTCATGTGCTGGTGTGCTTCATTTCCGTTCC TACAACAACAACAATAACAACAACTTCGTTTCGATTAATTCTTCTTCTTCTTTTACTTCTTCAAGTTCTAATATCGCTCGGAGTCGAAGTCGCCGCCGAT TTCAGACGCTAGTTGTAGCGGCTTCCGGCGATTACTATGCTACTCTTGGAGTCTCTAAATCTGCTACTGTTAAGGAGATTAAATCTGCTTATCGAAAGCT AGCTCGTCAGTACCATCCTGATGTGAACAAGGAACCTGGAGCTACTGACAAATTCAAAGAGATTAGTGCTGCATATGAGGTGCTATCAGATGATAAAAAG AGGGCTTTGTATGATCAATACGGTGAGGCTGGAGTCAAGAGCACAGTGGGAGGAGCATCAAGTGCCTATACGGTATTCAATGTGTCTTCTAATTTGTTTT TCATGTTTGAGTTTATGGAATAACACATAATTGAAAGGATGATAAAAACTTGATGCTAGGAGAATTACTGATAATATTACCAACTGCTCCAATACATATA TGTTGCCTTCTTTTTGGACACAAATTGAAATGCATGCCAATTTGAGTTGACTTGATCTATTCTTCTATTTCTGCTTCTATAAGGTTCATTTATATTGAAC AAATTTTTTTGCAGACTAATCCATTTGATTTATTTGAGACTTTTTTTGGGCCAAATATGGGTGGATTTGCTGGCATGGATTCAACTGGATTTGGAACACA GCGTCGTAGTACCGTTACTAAGGGTGAAGACATCCGGTATGATTTCTCGTTGGATTTTTCTGAGGCAATTTTTGGAACAGAGAAAGAATTCGAGCTTTCC CATTTAGAAATATGTGAAGTCTGTACGGGTACAGGAGCAAAGATAGGCTCCAAGAAGAGAATATGTTCTACTTGTGGTGGGAGGGGTCAGGTGATGAGGA CTGAGCAAACACCTTTTGGGTTGTTTTCACAGGTTTCAGTATGTCCAAACTGTGGAGGGAATGGTGAAGTCATATCTGAATATTGTCGTAAATGCAGCGG TGAAGGTCGTTTACGGGTCAAGAAAAATATTAAAGTTAAAGTTCCTCCCGGGGTTAGCTCAGGCAGTATTCTAAGAGTTGCTAGGGAGGGTGATGCTGGA CCAAGCGGGGGCCCGCCTGGAGATCTTTATGTATATCTCAACGTGGAAGAGATACCAGGAATTCAAAGAGATGACATAAATCTCCGCTCAACAATATCCA TCAGTTATCTAGATGCCATAATCGGGGCTATTGTGAAGGTTAAGACAGTTGAAGGCACTTCTGAACTACAAATACCTTCGGGCACCCAACCTGGAGATGT CCTTGTCCTTGCAAGGAAAGGTGTACCGAAATTAAACAGACCATCAATACGCGGTGACCACTTATTTACAGTTAAAGTTACTATACCGAAACGGATTAGC ACAAAGGAACGTGAGTTGCTTGAAGAACTTGCTTCTCTAGGCACAACAAGTAGCCGTTCAGTATCTCGCCCTAAAACTAACTCTTCCAGAAGTAGTGAAG GCCCTTTAGCTCAAAAGGCTGAAAGTCCAACTGAAACAGTTTCAGAAGAAGTTGAACAAAAAGAGGACCAAAATGATATATGGAAGGCATTAAAGGACTT AGCTGGGTCCGTAGCAAATGGAGCTGTAAAGTGGCTGAAAGATAATCTCTAGTCGCATTGATTTATTAGATGGTCCAGAGTCTTCAGGATGCAGCTTATC TAATTGTGGCTCAAGTTTTAATGATTCCAACAGCATCTTCAACTATGCAGGCATTTTTGTTGGGTGCTTTAACTGAAAATTGTTCTCCACACAGAAATGG GTCATGCATATTCTTTTATTTGTAAATTTTGGCACAAAGACCATGTATACAGAACCACTCGTTCACGGATCTTCAAATTGTACTACATGAGCATGTTGCG GTAGAAAAAGGCGGTGTATGCCTGACTTGAAGTTTAAGGTCTATTTGAGTCCTATAGTTAGTTTTCATCAAGTGAATCCTAATGTTGAATTAGGGGGAAT TTTAGCTTTATAAAAGCTGTTTCCAATTAGGACCTTGTAAGCGTATTTCTTTCATTTTTTGTTGGTAAAACCATGACATTTTGTAGTATCCTTTTGGTGT AAGACTAATTTTTGTTTGCATGCTGATCCCAGGTATAAGATGTTTCTAGTGTATTGTAAAAGGATCAAGGTCCTCCCTCACCTGTTGGTAGAAAGCAATA TCAAATATGATCAAACTTATTTATGTTGTTATGTTTATTTAAGTTAAACATATAAATAAAGGGTGAAGCTTTGCTGAATCAACAATGGTTTATTCATTTT CAACAACAGGAGAGGATTCTGATCCATTGTAAAACTCACTGACCTTATAGTTCAGTTCAATGACAAACCACG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_52291; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_75649
| Blastp | Chaperone protein DnaJ from Thermosynechococcus with 54.14% of identity |
|---|---|
| Blastx | Chaperone protein DnaJ from Cyanothece with 54.98% of identity |
| Eggnog | ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins (By similarity)(COG0484) |
| Kegg | Link to kegg annotations (tll0790) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019448083.1) |
| Pfam | DnaJ C terminal domain (PF01556.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |