| Id Trinity | FTRINITY_DN55537_c3_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_75626 |
| Sequence | GCTCAAGCACCACCCCTTATCTCATGGCCCCACAATCTTTTTTCATTTCTACCAATATCATCGCACCATAAAGCCTCACCCTTTTCATCCCCATTTCCTC ACACACCATCGTTACTCCTCTGAATATAAATCCATCAAACGAATAAACGCTATGGACAAATAACACAAAATCTTCATCTTCTATTAACATCTTTCTTCAA TTCAATGGCTCTTATATCTCTCTCACTTCTTCCCTCTCTTCTTCCACACTCTTCTTCTTCTTCTTCTTCTTCATGTGCTGGTGTGCTTCATTTCCGTTCC TACAACAACAACAATAACAACAACTTCGTTTCGATTAATTCTTCTTCTTCTTTTACTTCTTCAAGTTCTAATATCGCTCGGAGTCGAAGTCGCCGCCGAT TTCAGACGCTAGTTGTAGCGGCTTCCGGCGATTACTATGCTACTCTTGGAGTCTCTAAATCTGCTACTGTTAAGGAGATTAAATCTGCTTATCGAAAGCT AGCTCGTCAGTACCATCCTGATGTGAACAAGGAACCTGGAGCTACTGACAAATTCAAAGAGATTAGTGCTGCATATGAGGTGCTATCAGATGATAAAAAG AGGGCTTTGTATGATCAATACGGTGAGGCTGGAGTCAAGAGCACAGTGGGAGGAGCATCAAGTGCCTATACGACTAATCCATTTGATTTATTTGAGACTT TTTTTGGGCCAAATATGGGTGGATTTGCTGGCATGGATTCAACTGGATTTGGAACACAGCGTCGTAGTACCGTTACTAAGGGTGAAGACATCCGGTATGA TTTCTCGTTGGATTTTTCTGAGGCAATTTTTGGAACAGAGAAAGAATTCGAGCTTTCCCATTTAGAAATATGTGAAGTCTGTACGGGTACAGGAGCAAAG ATAGGCTCCAAGAAGAGAATATGTTCTACTTGTGGTGGGAGGGGTCAGGTGATGAGGACTGAGCAAACACCTTTTGGGTTGTTTTCACAGGTTTCAGTAT GTCCAAACTGTGGAGGGAATGGTGAAGTCATATCTGAATATTGTCGTAAATGCAGCGGTGAAGGTCGTTTACGGGTCAAGAAAAATATTAAAGTTAAAGT TCCTCCCGGGGTTAGCTCAGGCAGTATTCTAAGAGTTGCTAGGGAGGGTGATGCTGGACCAAGCGGGGGCCCGCCTGGAGATCTTTATGTATATCTCAAC GTGGAAGAGATACCAGGAATTCAAAGAGATGACATAAATCTCCGCTCAACAATATCCATCAGTTATCTAGATGCCATAATCGGGGCTATTGTGAAGGTTA AGACAGTTGAAGGCACTTCTGAACTACAAATACCTTCGGGCACCCAACCTGGAGATGTCCTTGTCCTTGCAAGGAAAGGTGTACCGAAATTAAACAGACC ATCAATACGCGGTGACCACTTATTTACAGTTAAAGTTACTATACCGAAACGGATTAGGTAATGGGTCAATTTTAAAGAGTTGTCTTTAGTTTGTCTCTCT GTTACACCCTCATGCTATGTATTGATTTCTGTCCATATCGGTAGTTTGACATGAATTGCCTCTTCTATGCATTTTCAGCACAAAGGAACGTGAGTTGCTT GAAGAACTTGCTTCTCTAGGCACAACAAGTAGCCGTTCAGTATCTCGCCCTAAAACTAACTCTTCCAGTAGGTGTCTCCTTAATGATTTGTGTCCGTTAT TTTTTTATTTTTTAATTCATTAACCGATGGCCACAGTTAGTCATTTGACACTTAAATACGTCATGTTCATAAGGCACTGGTTAGGTCTTCTCAACACATT TGAACGTTGCAACTTGCCATATAGAAAATGTAAAATCTTACAAGACAATTGGTAGGCTCTAGATATGTTATTTGTGAACCATGTTGACTTTTTACCTTCT GCATCAGGAAGTAGTGAAGGCCCTTTAGCTCAAAAGGCTGAAAGTCCAACTGAAACAGTTTCAGAAGAAGTTGAACAAAAAGAGGACCAAAATGATATAT GGAAGGCATTAAAGGACTTAGCTGGGTAATTATTTTATTTGCTTTTTATTTTTTCTCATCAAATTGTTGACTGTGCCTTCAGTTTTCTCAAGCTGAAAAC ATCAATTGCTAATTATGTAGAGCAACATTTTATAAAAATTCTAAGTAAATCATTTTAGTTTTTAGTAGCATGGAATTAAATAATCCATATTATACCAGAA GCTCTTAAAAGGACTCATGAATCTACCCTTAAGTAATTTTGAGCGTAGATTATGTTCTTTATCAATTTCTCTATGTACTCTAATGCTATTTTTCCAAATG AGAACTGATTCATAGCACAAGTCTATTGCACATTGAGTTGATACATCAGAACTGGCATTGTGGGTAATGTTGGTGCATCATATTATCGTGTGAATCCTTA CAATTTGTCTGGAAAAGAACTGCTGAACTGGGCTGATTTATTTGTGCAAATTGGTTGACTGTTTTAGATGTGCCATTCATTTACTGATATTTTATGAGAT GCTAAGTTACTATTTTGTTTCTTATAAATTTACCAGTCCTACTGATAGGATGAAAGTTTTCTCAGTTCATCATTCTTAATTGATTTAAATTCGAATCAGA AACTCAAACCATGTGTGGATTGATGTTTTTTGTTGAAAATTATGACAATCCAATTTTGGGTTGTTGTGTTATAACTTATTAGAGACAAGCTGATCACTGG ATAAGAATAATTCTTTTGTTGTTGAGTGTGGTTGTTAATTTTGATGACTTTTCATTGTACACATGCTGATCTGACAAAATCTTTGCTGCTATTGAAACTT ACAGGTCCGTAGCAAATGGAGCTGTAAAGTGGCTGAAAGATAATCTCTAGTCGCATTGATTTATTAGATGGTCCAGAGTCTTCAGGATGCAGCTTATCTA ATTGTGGCTCAAGTTTTAATGATTCCAACAGCATCTTCAACTATGCAGGCATTTTTGTTGGGTGCTTTAACTGAAAATTGTTCTCCACACAGAAATGGGT CATGCATATTCTTTTATTTGTAAATTTTGGCACAAAGACCATGTATACAGAACCACTCGTTCACGGATCTTCAAATTGTACTACATGAGCATGTTGCGGT AGAAAAAGGCGGTGTATGCCTGACTTGAAGTTTAAGGTCTATTTGAGTCCTATAGTTAGTTTTCATCAAGTGAATCCTAATGTTGAATTAGGGGGAATTT TAGCTTTATAAAAGCTGTTTCCAATTAGGACCTTGTAAGCGTATTTCTTTCATTTTTTGTTGGTAAAACCATGACATTTTGTAGTATCCTTTTGGTGTAA GACTAATTTTTGTTTGCATGCTGATCCCAGGTATAAGATGTTTCTAGTGTATTGTAAAAGGATCAAGGTCCTCCCTCACCTGTTGGTAGAAAGCAATATC AAATATGATCAAACTTATTTATGTTGTTATGTTTATTTAAGTTAAACATATAAATAAAGGGTGAAGCTTTGCTGAATCAACAATGGTTTATTCATTTTCA ACAACAGGAGAGGATTCTGATCCATTGTAAAACTCACTGACCTTATAGTTCAGTTCAATGACAAACCACG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_52291; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_75626
| Blastp | Chaperone protein DnaJ from Cyanothece with 55.04% of identity |
|---|---|
| Blastx | Chaperone protein DnaJ from Cyanothece with 55.04% of identity |
| Eggnog | ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins (By similarity)(COG0484) |
| Kegg | Link to kegg annotations (PCC7424_0560) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019448083.1) |
| Pfam | DnaJ domain (PF00226.30) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |