| Id Trinity | FTRINITY_DN55537_c3_g1_i9 |
|---|---|
| Name Transcript | Ll_transcript_75641 |
| Sequence | GCTCAAGCACCACCCCTTATCTCATGGCCCCACAATCTTTTTTCATTTCTACCAATATCATCGCACCATAAAGCCTCACCCTTTTCATCCCCATTTCCTC ACACACCATCGTTACTCCTCTGAATATAAATCCATCAAACGAATAAACGCTATGGACAAATAACACAAAATCTTCATCTTCTATTAACATCTTTCTTCAA TTCAATGGCTCTTATATCTCTCTCACTTCTTCCCTCTCTTCTTCCACACTCTTCTTCTTCTTCTTCTTCTTCATGTGCTGGTGTGCTTCATTTCCGTTCC TACAACAACAACAATAACAACAACTTCGTTTCGATTAATTCTTCTTCTTCTTTTACTTCTTCAAGTTCTAATATCGCTCGGAGTCGAAGTCGCCGCCGAT TTCAGACGCTAGTTGTAGCGGCTTCCGGCGATTACTATGCTACTCTTGGAGTCTCTAAATCTGCTACTGTTAAGGAGATTAAATCTGCTTATCGAAAGCT AGCTCGTCAGTACCATCCTGATGTGAACAAGGAACCTGGAGCTACTGACAAATTCAAAGAGATTAGTGCTGCATATGAGGTGCTATCAGATGATAAAAAG AGGGCTTTGTATGATCAATACGGTGAGGCTGGAGTCAAGAGCACAGTGGGAGGAGCATCAAGTGCCTATACGACTAATCCATTTGATTTATTTGAGACTT TTTTTGGGCCAAATATGGGTGGATTTGCTGGCATGGATTCAACTGGATTTGGAACACAGCGTCGTAGTACCGTTACTAAGGGTGAAGACATCCGGTATGA TTTCTCGTTGGATTTTTCTGAGGCAATTTTTGGAACAGAGAAAGAATTCGAGCTTTCCCATTTAGAAATATGTGAAGTCTGTACGGGTACAGGAGCAAAG ATAGGCTCCAAGAAGAGAATATGTTCTACTTGTGGTGGGAGGGGTCAGGTGATGAGGACTGAGCAAACACCTTTTGGGTTGTTTTCACAGGTTTCAGTAT GTCCAAACTGTGGAGGGAATGGTGAAGTCATATCTGAATATTGTCGTAAATGCAGCGGTGAAGGTCGTTTACGGGTCAAGAAAAATATTAAAGTTAAAGT TCCTCCCGGGGTTAGCTCAGGCAGTATTCTAAGAGTTGCTAGGGAGGGTGATGCTGGACCAAGCGGGGGCCCGCCTGGAGATCTTTATGTATATCTCAAC GTGGAAGAGATACCAGGAATTCAAAGAGATGACATAAATCTCCGCTCAACAATATCCATCAGTTATCTAGATGCCATAATCGGGGCTATTGTGAAGGTTA AGACAGTTGAAGGCACTTCTGAACTACAAATACCTTCGGGCACCCAACCTGGAGATGTCCTTGTCCTTGCAAGGAAAGGTGTACCGAAATTAAACAGACC ATCAATACGCGGTGACCACTTATTTACAGTTAAAGTTACTATACCGAAACGGATTAGCACAAAGGAACGTGAGTTGCTTGAAGAACTTGCTTCTCTAGGC ACAACAAGTAGCCGTTCAGTATCTCGCCCTAAAACTAACTCTTCCAGAAGTAGTGAAGGCCCTTTAGCTCAAAAGGCTGAAAGTCCAACTGAAACAGTTT CAGAAGAAGTTGAACAAAAAGAGGACCAAAATGATATATGGAAGGCATTAAAGGACTTAGCTGGGTCCGTAGCAAATGGAGCTGTAAAGTGGCTGAAAGA TAATCTCTAGTCGCATTGATTTATTAGATGGTCCAGAGTCTTCAGGATGCAGCTTATCTAATTGTGGCTCAAGTTTTAATGATTCCAACAGCATCTTCAA CTATGCAGGCATTTTTGTTGGGTGCTTTAACTGAAAATTGTTCTCCACACAGAAATGGGTCATGCATATTCTTTTATTTGTAAATTTTGGCACAAAGACC ATGTATACAGAACCACTCGTTCACGGATCTTCAAATTGTACTACATGAGCATGTTGCGGTAGAAAAAGGCGGTGTATGCCTGACTTGAAGTTTAAGGTCT ATTTGAGTCCTATAGTTAGTTTTCATCAAGTGAATCCTAATGTTGAATTAGGGGGAATTTTAGCTTTATAAAAGCTGTTTCCAATTAGGACCTTGTAAGC GTATTTCTTTCATTTTTTGTTGGTAAAACCATGACATTTTGTAGTATCCTTTTGGTGTAAGACTAATTTTTGTTTGCATGCTGATCCCAGGTATAAGATG TTTCTAGTGTATTGTAAAAGGATCAAGGTCCTCCCTCACCTGTTGGTAGAAAGCAATATCAAATATGATCAAACTTATTTATGTTGTTATGTTTATTTAA GTTAAACATATAAATAAAGGGTGAAGCTTTGCTGAATCAACAATGGTTTATTCATTTTCAACAACAGGAGAGGATTCTGATCCATTGTAAAACTCACTGA CCTTATAGTTCAGTTCAATGACAAACCACG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_52291; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_75641
| Blastp | Chaperone protein DnaJ from Cyanothece with 55.12% of identity |
|---|---|
| Blastx | Chaperone protein DnaJ from Cyanothece with 55.12% of identity |
| Eggnog | ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins (By similarity)(COG0484) |
| Kegg | Link to kegg annotations (PCC7424_0560) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019448083.1) |
| Pfam | DnaJ domain (PF00226.30) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |