| Id Trinity | FTRINITY_DN55543_c1_g1_i17 |
|---|---|
| Name Transcript | Ll_transcript_75110 |
| Sequence | ATTATTTGATGACACTTGAAACATGATTTGGTCATGTGGTCACGAAATAGATAAGGTACCAAGAGAAGAAGAAAGGTAGAAAGGTCACTAACATCACACG TTGCATGACGACTTAAGCAATTTAATTTACAAATAAAATCTCTCTCCGCCACTCAAAACTGATTACAGATTATAATCACTTAAATTTTGAAGCAGCTTCA TGGCTTTTGAAACTGCTTACTCTTCTCTATCACTTCCAAATTCAACTACCTTCTTACACTCTTCTTCTTCTTCCAATATCCGAAGACTCAAATCTACTTC GCTTCCTTCTAGATTCTTCTTCAACTTCCAATCGCAACGCATCGTTTTGACGCCGAAAAAGCTTGTGGTGATGAAACCTTGCGCGGTGAGGATTGAAGAG AAGAATAGTAACGTTGCTGGAAGTGAAGGAGGAGAATGGGAGAAGGTTTCTGCGGTGTTGTTTGACATGGACGGTGTGCTTTGTAATAGTGAAGAACCTT CTAGAAGAGCAGCGGTTGATTTGTTCGCCGAGATCGGTGTTCATGTCACCGTCGATGATTTTGTGCCATTCACGGGAACCGGAGAAGCAAACTTTTTGGG GGGTGTGGCTTCTGTTAAGGGGGTTAAAGGATTTGACATTGAAGCTGCAAAAAAGAGATTCTTTGAAATATATTTAGACAAGTATGCAAAACCAGATTCT GGAATAGGATTTCCAGGTGCCTTTGAACTCATTTCTCAGTGTAAAAACAAAGGCCTTAAAGTGGCCGTTGCATCTAGTGCTGATCGTATAAAGGTCGATG CAAATCTGGCTGCTGCTGCTTTACCATTGTCAATGTTTGATGTGATTGTGTCTGCTGATGCTTTTGAAAACTTGAAACCGGCTCCGGATATATTCTTAGC TGCTTCAAGTATTTTAAATGTGCCCCCCGGTGAGTGCGTTGTTATAGAAGATGCGCTAGCTGGAGTGCAAGCTGCCAAAGCTGCCCAAATGAGATGCATA GCTGTCAGGACCACATTATCAGATGAGATTTTAGAATCTGCTGGTCCAATACTTATCCGAGATGACATTGGAAATGTTTCAATCGATGATATTCTGAGTG GTGGCTCTGTTGGATATAATAAGAGTATGCAGGGCTTGGAAACTCTAAACAATTCTTCACGATCTTCATCTACTGTGCTTCTTGGAAAAACAGATGATGA AGATGGAAAAACTACCGGAGGTACTGATGAGGGAATTTTCTCAATTGAAGGGTTGCAGGGTTCTCGACGAGATATACTGAGATTTGGAAGTCTGGGCATT GCTATCTCTTGCCTAGTCTTCACCTCAAGTAATTGGAAGGCAATGCAATATGCTTCCCCGAAAGCAGTTTGGAATCTCTTCTTTGGTGTTACCAAACCAT CTATGGAAGAGAAAGAAGGTAACTCAAGATATGATAGGATTCAGCAATTTGTGAACTACATAACTGATCTAGAAAGCAGGGGAAATGCTCAGATTGTTCC AGAATTTCCAACCAAACTTGATTGGCTGAATACAGCTCCGCTTCAGTTTGGCAGGGACCTAAAAGGAAAAGTTGTTCTGCTGGATTTCTGGACTTATTGT TGTATAAACTGTATGCATGTGTTGCCTGACCTAGACTTTTTGGAGAAAAAATACAAAGATATGCCGTTCGTCGTTGTGGGTGTTCACTCTGCAAAATTTG ATAATGAGAAAGATTCTGAAGCTATTCGCAATGCAGTTTTACGCTATGACATTACTCACCCTGTTGTCAATGATGGAGACATGTACCTTTGGCGGCAGTT GGGCATAAATTCATGGCCAACGTTTGCTATAATTGGCCCAAATGGTAAGCTCCTTGCACAACTTGCAGGAGAAGGTCGTAAGAAGGATCTTGATGATTTT GTGGAGGCAGCACTTCTGTTTTATGGAAAACAGAACATGTTGGACAACACACCAATTACATTGAATTTGGAGAAAGACAATGATCCTCGCCTATTGACAT CCCCATTGAAGTTTCCTGGCAAGCTAGCTGTTGATGTCCTCAATAATAGGCTTTTCATTTCGGACAGCAACCATAACCGCATAGTTGTTACTGACCTCAA TGGGAATTTTGTTGTACAAATTGGGAGCAGCGGGGAGGAAGGTTTGCAGGATGGCTCCTTTGATGATGCCAACTTCAACCGTCCTCAGGGCCTTGCTTAT AATCCAAAGAAAAATATCCTTTATGTCGCAGACACCGAAAACCATGCTTTAAGGGAAATTGATTTTGTTGATGAGAAAGTGCGTACTCTTGCTGGAAATG GGACAAAGGGATCTGATTATATTGGAGGAGGAAAAGGAGACACACAGCTTCTTAATTCCCCTTGGGATGTATGCTTTCATCCAATTGAAGAAAAAGTTTA TATTGCTATGGCTGGCCAACATCAGATTTGGGAGCACAATATATTGGATGGAATTACAAGGGCATTTAGTGGAGATGGTTATGAAAGAAATTTAAATGGA TCAAGTTCTACAAGCACATCATTTGCACAACCTTCTGGTCTTTCATTGTCTCAAGATCTAGCGGAGATCTACATAGCTGATAGTGAGAGTAGTTCCATTC GAGCTGTTAATCTGAAAACTGGAGGATCTCGGTTGCTAGCTGGTGGTGACCCAATTTTCTCAGACAACTTGTTTAAGTTTGGTGACCAAGATGGAATAGG CTCTGAAGTACTTTTTCAACATCCATTAGGGGTTGTGTCTGCAAAGGATGGTGAAATTTATATCACAGATAGCTACAATCACAAGATCAAGAAGTTTGAC CCAACTAGTAAAAGAGTTAGCACCATTGCAGGGACAGGAAAAGCTGGTTTCAAGGATGGGACAGCTGTGACAGCTCAGGCTGATCAAGCACTATAGATGA CAAGTTTCTGAAAAATAGCAATCAATTCTCCTAGGCTTTGGAATATCTGATGCACTCATCTCATTGTTATTCTTCTGCAAGTTGTTTGTTGACCATAGGG ATTTAAAGAGAATCACCATAAAAATATTTATGCTGTTGAATGAAAGTTGAAAGGGTACAAGTGGTGAAAGCTATGCTAGTTAAGATTGCAAAACTGACCG AGTCGGATCATATGTCATTCCCCATGATTTGATAGAAAAAATCTATATTTAATTGGCCACACAAACAAGTGTCAGCAGAACGAAGTAAAACGAATGAAGT CTTTCTTACCTAATAGCCACATATGTATATTAACATATTTATCAATGATCTTGCAGCTTTCTGAACCATCAGGAATTGTTGAAGGGGACAATGGTACTGC TCTTTTATCTGCAATTAATTCAATACATGAACATTAACGAATTGAAGAGATCATCGAAACTTATTATCTAAATAGGATTGATATCAAATGAGAACTCTGT CATTGTGAGAGGTCAAAGGAACAAATCTTTACTATTGGATTTTATTTGAATAGTCAAGATTAAAAGATAAATACATGTGACTTTTGCTCTGTTTTGAAAC TTTAATAATGAATATCCATTGCTAAGTTACAATGGGACAGGGGAATTAAACCCTAATACCTTCATTACAGTTGACTTAAAGTACAGTTGACATAATTATC ATCTCATTATGCATAACTACGACATGCATAAACTGCCTTTTTGTTGTACAAGTAGATATCTTGCAAACGGAATTTGCAGATGTTGATCCAATTCTTGTGT AAAATGAGCTTAAGCTTGGAAATATCTTTTTTGTTTTATTTTCAGGGAGACTATTCATAGCCGATACAAACAACAGTTTAATTCGATATCTAGATTTGAA CAATGATGAATATGCACTCAGTACCTTAGAGCTTAAAGGTTTTCAGCCTCCTAAACCCAAATTGAGATCTTTTAAACGTCTCAGGAGACGAACATCAGCT GACACAGAAACCATTAACATTGATGCCATTTCATCCAATGAGGGAAACTTGTCTATTGAAATATCATTACCAAATGAGTATCATTTCTCGAAGGAAGCAC GCAGTAGATTTAGTGTTGATATTGAGCCTGAAGATGCTGTGAATATTGATCCACTAGATGGATTCCTTAATCCAGAAGGATCTGCAACCCTTCACTTTAA GAGATCCTCTAACTCTGCTTCAGTGGCAAGAATTAATATTAAGGTTTACTATTGCAAGGAAGATGAGGTTTGTTTGTACCAATCATTGCTGTTTGAGGTC CCTTTCCGAGACGGAGCTCCTAACTCTACCAAAGCGGATGTCACCCTTGCACATTTTGTGAAGCCCAAAACTTCAACCAGCAGCTCACTGCAGTCAGTTG GCATGTGATACTGTAAACCAGGTTTTATTTGAGCACCCTTTCTATTTCTTGCTCATTTTTGCAACAGATAATGGCTCCTGTTAATCAGTACTAAAAAGTA TTTATTGGGAAACTTCCCAGAACACATTCCAAGAACAACTTACTTCTTTTCATTCCATAAGTTAGCATATATAGAAAATAAGAATAGGACATAGTATGGA ATTATAAATTCTCAGTAAGGGTAAAATAAGGCAATTAGTAGAAGGGTTATACTTATACTAATATTGATCGATAGTGTAGAGCATTAGTTTCACCAAATCA CAAGTTAGACCTCTGGCTAACAAATGTGTTGTAGTTTGGTGCAAAGCACGAACTTAGTGGGTTTATTCCTATGCTTGGTCATCATATATATTGACAGGCA AGAAAATGGTTTGCTTATGCAGATTTATAATAAATAATAATTACATGTAAAATTTAATTTAATTCACCGCATTCTAGTTGGAAACTATTTGCGGATCAAA AGAAAGGTGGGTAACCTTTTGGTTAACTAATCCAGATTAAGATGCAGAGTCAATAACCTTTTTGTATCCAATTGTGCTTCCTCTTTGGGTATTCTGAGAA GAGTCATGGCAAATGAATTTCTGCACCATTGTCATGGTCAAACATTCATAATCATGTGACAAAAACCTTACATTAGTCCATCAAATATGTGTCCATTTTC AGTTTGTTCAGATGAATCTTCGCAATGCTCTTTGTTGATTAAAATCAGTATCAAATTAATCCAAATGTAAACTTAAGGCAATTTCCAGTTATAAAAGGAA TTTTTTTCATGATACAAATGAAAGGATTAAATTGATGCATCTGTTGATTGGTGAAGCATGACAAATTTAATATAAAAAAAATGAATATTAGTGAGGGACT GAGTAGATTGATTTTTTTTTTTAAAACCGCCAAGTTTGGACTAGTATTGAGTGATTTTGATAATTTGCATTTTGTCATAGTTCAAAACTCATTACCATCA ATGTCTAGAAGAACTTAGACAATAAAGCATGTCTCTTTCAAAGAGGCAAAGTTCCCTAGCATGTTGGTGTGAGACTCATCTGATCTTCACAGATTCCTTT CCAATTTTCTATCATCA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_52341; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_75110
| Blastp | Protein SUPPRESSOR OF QUENCHING 1, chloroplastic from Arabidopsis with 75.21% of identity |
|---|---|
| Blastx | Protein SUPPRESSOR OF QUENCHING 1, chloroplastic from Arabidopsis with 72.37% of identity |
| Eggnog | HAD-superfamily hydrolase subfamily IA variant 3(COG0637) |
| Kegg | Link to kegg annotations (AT1G56500) |
| CantataDB | Link to cantataDB annotations (CNT0001568) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019422610.1) |
| Pfam | haloacid dehalogenase-like hydrolase (PF00702.25) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |