Id Trinity | FTRINITY_DN55548_c0_g2_i4 |
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Name Transcript | Ll_transcript_75850 |
Sequence | CACCAATATAATATAAATAATGAAGCTACTTTAAATTCCTCACAGAACTTCAAAAAATTTAATAATCGATTTTCACAAAGAAAAGCATGATGCTCAAATT TGCTTCTATCTTCTCCAAATCTGCTTCTGCTTATTACTTATCTCGCCGTATATATCCAAATTCTCGAAACGCTTTCTCATTTTCCAAGTCTCATTTCTCA ACTGCATCATCTCCCTTCGCAGATTCTAGGGTTCCGAACACTCGTCGTTTCTGCACCGCACCGGAACAACGAGAATCGATCAACTACGATGTTGTGATTG TGGGAGCTGGACCCGCCGGTTTATCGGCGGCGATACGGTTGAAGCAAATGTGTGTTGAAAAAGGTGCTGATTTATCAGTATGTGTGGTCGAGAAAGGTGG TGAAGTTGGTGCTCACATTCTTTCTGGAAACGTCTTTGAACCGCGTGCACTTGATGAGCTTCTCCCGCAGTGGAAGCAGCAACAGGCTCCAATCAGCACC CCTGTTTCATCTGACAAGTTTTGGTTTCTCACCAAGAATCGTGCTATATCACTTCCATCCCCCTTTGACAACAAAGGCAACTATGTAATCAGTCTAAGTC AGTTAGTACGTTGGATGGGAGAAAAAGCCGAAGAGTTAGGAGTGGAAATATACCCAGGATTTGCTGCTAGTGAGATATTGTATGATGCAAACAACAAAGT TATCGGTATTGGAACTAACGATATGGGAATTTCAAAAGATGGTTCAAAAAAGGAGAATTTTCAACGTGGTGTTGAGGTCAAAGGTCGAGCGACACTTCTG GCTGAGGGATGTAGAGGTTCATTATCAGAGAAAATAATGAAAAAGTACAACCTGAGAGAGAAGGGAGGTGCAGAACATCAGACATATGCCTTGGGAATTA AGGAGGTTTGGGAAGTTGATGAACAAAAGCATCAACCTGGCACAGTACTCCACACATTAGGGTGGCCATTGGATCACAAAACATATGGAGGATCTTTTCT ATATCACATGAAAGATAAACAAATATCTATAGGCCTTGTTGTTGCTTTGAACTATCAGAACCCTTTTATGAATCCTTATGAGGAATTCCAGAAACTTAAG CATCATCCTGCAATCAAACCATTACTGGAAGGTGGAACAGTTATTCAGTATGGAGCTCGCACTTTAAACGAAGGTGGTATTCAGTCTATCCCATATCCGG TTTTTCCTGGAGGAGCAATTATTGGGTGTTCTGCTGGCTTTTTAAATGTGCCCAAGATAAAGGGAACACACACAGCAATGAAATCAGGAATGCTTGCAGC TGAAGCTACATTTGGTGCACTTCATGGAAGTCTGGGCATGGATACGTACTGGGATGCTTTGAGGAATTCATGGATTTGGCAAGAACTATATAAAGCTCGG AACTATCGGCCAGTTAGTGAAGCAATTTATTACCTTCCTTTATGCCATATTGATTGACCTTTTAGTTACAGATATCTTTTTCTTGTAGGCCTTTGAGTAC GGGCTTATTCCAGGACTGGCCTTAAGTGGTCTGGAACACTACATATTCAGGGGGAGGTATCCAATTACATTGAAGCATGGTAAACCTGATCATGAAGCTA CAAATGCTGCACAGCTGCATTCTCCAATTGACTATCCAAAGGCAGATGGTGTTTTGTCCTTTGATGTACCTACCTCTCTGCACAGGAGCAACACAAATCA TGATCATGATCAACCTCCTCACCTTCGTCTGAGAGACCCAAAGATTCCTGAACTTACAAATTTACCAGTGTATGCCGCTCCTGAGACACGATATTGTCCT GCACGAGTATATGAGTAATGTCCATTTACTACAGCCTGTTTTTTGAAGGGATTCTCAGTTTTTGAGTCATTCCTTGATATTTTTCATCTATCTTTACCAA ATACAGGTATGTCGGTGAGCAGAGTCAGT BLAST |
Tissue | flowers |
Gene name | LI_gene_52406; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_75850
Blastp | Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial from Arabidopsis with 75.35% of identity |
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Blastx | Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial from Arabidopsis with 79.75% of identity |
Eggnog | geranylgeranyl reductase(COG0644) |
Kegg | Link to kegg annotations (AT2G43400) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019457832.1) |
Pfam | FAD binding domain (PF00890.23) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |