Id Trinity | FTRINITY_DN55559_c1_g1_i1 |
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Name Transcript | Ll_transcript_76263 |
Sequence | CTTCTCTCTCTTCAATTTGCTTCTATTCAGTTCTATATATGTCTCATTTCTTTGTCCAACAACACAACCTTTTACAGTTTCCAATAATTTCTCCCCCAAC TCCTCCATCACCATAATACATAGAATGTCTTCGCCGGGCTTCACCGCCGGTGCCGCCCCTGACTTTTTCTCCACCATGCCGTCAACAACCATCATCAACA ATCCCACCACCACCACCACCCTCAACAACCACCACCACCTTCTCCCTTCTCACCCGATATACCGAACCCAACAACAACAACAACTACCCTCAATTTTTCT AGATCCTTCTTCTCAGATCCCTCAGCAACGTCAAATCCAAACCCTCATGGGTAAACGCACCCTCGCTGAATTTCAAAACCACCGCAACCACAACCACAAC AACCTTAATCTCAACCATAACAACCTTAACAATGACCAGAACCATGTTTTCTCGAACGTTCTACTCCGCTCTGTGAAACCCAGAACAACGTTTCAACATG GTTCTACTTCTCCGTTATCTCCTATGGATTTTTCCGTTCCGGAATTACATAACCCTAATTCGGTATATCAATCGCAGCGTTTTGGCATGCCACTTCTTCA GCAGCTTCGCCCTCAACCCATTAACCTTTTCAACACCAACACCAATTCGATCTTCCAGAACCCAAATTTTCCTTACCGGACCTCAAACTTGAGTCAGATT CCGAACCAGGTTCAGTTTCAACTCCAACCCTCTGAACCAGAGAAAAAGATGATGGAAAACCGGCTTCAAGAACTTGAGAAACAGCTTCTCGAAGATAACG ATGAAGAAGAAGGAGAAGCTGATACAGCATCAGTGATCACAAACAACGAGTGGTCAGAAACAATTCAGAATCTGATTAGTCCTAACCCAACACAGAAACC GGTTTCTTCATCTCCAACTTCATCGACTACATCATCAACTTCATCTTCTTCCTCTATCGTATCACCTAGTTTTCCAAGACAAGAGCTTTTGGAAGCTGCA TCTGCAATTCATGAAGGGAAGAATGAAACTGCTCTGGAGATTTTAGCCCGGTTGAGGCGGGTCGGGTCAAACCCGAACGAGAATTCAGATCAGCGGTTGA ACAATTGCATGGTAATGGCGTTGAAATCGCGTATGAACTCGGTTGAAAACCCTCCTCCGGTGGCTGAACTTTTCAGTAGGGAACACGCTGAGTCGACTCA GTTGATGTTTGAAAACTCGGTTTGTTTTAAAGTTGGGTTCATGGCTGTGAACATAGCAATACTTGAAGCGGCATTTGAAGAAGGAAACGAGAAAGGGTTC TGTGTTGTTGATTTTGATATCGGGCAAGGGAAGCAATATATGAGTCTCTTTCATATAATTTCGGCGCGTAAGTCTCAGTCGCCGATTGCGATGAAGGTGA AGATTTTGGCTGTGGAAGAGAACGGTGGAGAAGAGAGGCTGAGAGCGGTGGGTGAGATGCTGAGTCGACAGGCTGAGAGGTTGAAGATCGAGTTCGAGTT CAAAGTTATGGCGATGACTCAGAAACTCGATGAGTTGACTCGCGAGTCACTTTGTTTAGACTCGGATGAGACCGTTATTGTGAATTTTGCGTTCAAGTTA AACCGAATCCCCGACGAGAGCGTTTCCACGGAGAATCCACGCGACGAGCTTCTGAGGCGCGTGAAGGGACTCGCTCCGCGCGTGGTGACGTTGTTTGAGC AGGAGATGAATAGCAACACGGCGCCGTTTTTGGCGCGTGTGGCGGAGTCGTGCTCGTATTATGGCGCGTTGTTTGACTCAATTGATGCTGTCATGGGGAA AGACAACTCGGATCGAGTCAGGGTGGAAGAGACACTGAGCCGGAATATGTGTAACTCGGTGGCGTGTGAGGGAAGGGATCGCGTGGAACGGTGTGAGGTT TACGGTAAATGGCGCGCGCGTATGAGCATGGCAGGGTTTAAGTTGAAACCGCTGAGTCAGAACGTTGCCGAGTCAATAAAGTCTCGACTCGCCATGGTTA ATAGCCGTGTCAACTCGGGACTCACTGTGAAAGAAGAGAATGGCGCTATTTGCTTTGGTTGGATGGGACGAACACTCACAGTGGCATCTGCGTGGCGTTA ACATCGTTCACTTTTTTTTTTCTCTATTTTTTATTTTGTTCTGAATATTATTTGTGAAATTGTTACTATATTTAACGTTATCTAGATAATGGAAAGGCAA AGAAAATTTATTCACGAAAATTGTTATTATAAAAAATGCGTGATGACAAAGATAGCGGTAAATGTTATATATCAAGCCATATCTCCTCTAACATAAATGT TAGTGGTATAAAATTGAGCAATGGTATATCATTTTACACAATTAAATTCTCGATAACATATATTATATGTAATCTAGTTATTAATTTAATATAAAGTGTT ATTTTGTGATAGTTGTTATTTTTTATTGTGTAAGAGAACATATCATTTCTACATAAAAATGTGTACACATATCTTGTAAGTGTTTTTTTATCACCGATAA AATAAGTAATACAAATAAATGAATGAGGATGATGTACTTATTATATATGAATTTTTATATTAGCAGTGTATAAATATTATTCTCATTCGTGTTTATTGTA CCAAATATGAACAAATAAAGAAGTGTTTGGATTCTTGAAAATTTATGATTGCGTGATATGCATTTATGAATTTTGTTGATGTAGTAGTAGTTGATATACA CTTTTTATGATGATGGTTTGGATGTGTGAAAGGAGTTGGTTGCAGTTTGGTAGATAGCTGACTTATTTGCGTTAAAGAGTGGATGGGAATGCCCATTTAC ATTACCAACAAATGGGGGCTCCACTTTATAAG BLAST |
Tissue | flowers |
Gene name | LI_gene_52514; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_76263
Blastp | Scarecrow-like protein 8 from Arabidopsis with 48.1% of identity |
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Blastx | Scarecrow-like protein 8 from Arabidopsis with 47.7% of identity |
Eggnog | GRAS domain family(ENOG410YA1H) |
Kegg | Link to kegg annotations (AT5G52510) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019453194.1) |
Pfam | GRAS domain family (PF03514.13) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |