| Id Trinity | FTRINITY_DN55559_c2_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_76268 |
| Sequence | CACATGTCAATTGCATATGGAATGAAAATTTTGTAAGCTAAAATAATTATGTATAATAATTCTTGCAAAAAATAGATGTTTTTTATTTAGTCTCAAATAA TTGTGGATGTTGTTCCCGGCTCTCGGAAATAATTGACTCTTCACTGCGACGATGTGGTTGTGGGAAACCAAAAAAAATTCACCTTTGAAGTCTTTCTGTT AATACGATCCTCTTCAGAATTGCTTTGTCTCTTCGTTGATGTCTATGATTAATGAGTACATACATTGCATGCTTTTCTTCTTTGGTTGTGACTTTCTCTT TGACCTTTTCTGTTCATAAATTCTCAACGACCTTTGATGCATAGTAATATATACCCTTTATTCTATATATTGTCTACAATATTTGGTATCAAATATAATG ATAGACATTTGGACACATTACCTTATGGTCGGAGGGTAAGCAACCTTACTGTTTCATCGATACTCGCCGTTTTATGCTAGCATAAGGTCTAGCACATACC TTATAGGACTGTACTGATCAATGTTGTGAATGTGGGACACAGATCGGAGCGGAGTTTGTCGGAACATTCATATTGATATTTGCAGCAACAGCTGGGCCCA TAGTGAACAACAAGTACCATGGAGCAGAGGGTCTAATGGGTAATGCAGCTACTGCAGGACTAACAGTGATGTTCATCATTCTCTCAATTGGACACATCTC TGGTGCACACCTTAACCCATCACTCACCATTGCATTTGCGACGTTCCGCCATTTCCCTTGGACACATGTTCCTGCATACATCGCAGCACAAGTTTCTGCT TCAATCTGTGCTTGTTTTGCTCTCAAAGGTGTTTATCATCCTTACCTCACTGGTGGAGTCACTGTCCCTTCTGTCACCGTTGGCCAAGCTTTTGCAACTG AGTTTATCATCACTTTTATTCTCATGTTTGTGGTCACTGCTGTCGCTACTGATACTCGTGCGGTTGGTGAATTGGCAGGTATTGCTGTTGGTGCTACAGT TTTGCTCAACATTCTTATATCAGGGCCAACAAGTGGTGGTTCCATGAATCCGGTGCGCACCTTGGGTCCAGCCGTTGCAGCAGGAAATTACAAACATATC TGGCTCTATTTGGTGGCGCCAACACTCGGTGCTCTTGCTGGTGCAGGTGTTTATACGCTCGTCAAGCTCCATGACTCCAAGGACGAACCCCCACGTCAGG TTAGGAGCTTCCGTCGCTAGTATCAACGACCCTCCTCTTCCTCCGCCTCCACCCCACTTTTCATGTTTCTTTTTTCATGTGTGATATTATACAACCAAAT TAAATAAAATGTGGGGGGACTCCGAATGACCGAGCATGTAAAATTAAGTGTGTATGATTTGTTTTGTTGTGTTGTGTTATATGTTGGCAATCTTGTGGAT GTAGAATGCTTTTTGTTAAGGGGCAGACTATACCACATTGTGTGAATTGTAATGTGTGTACGTTAATAATGAATAATTTTGGATAGTTCCTCTAAAGTGA TGTATAAGTTGAGCAAGAAAGAGTGTAAATTGTCTTTCATTAGTTAAAGTGCATCTAGGTGGAGATCTTGACTCACTTTATCTTTGACTGATCCATGATA AGTCACACTCTTATTTGCTCACTTTGTACTCAAAGTTCATCTTAGAGGAGCTCTTTTCCAATATGGTTTTCAGTGTAGAACATCACTTATTTTATTTTTT GCAGCATACCCTTTTCAAGCTACAAAAACATAGGCTAATTAATCATTAATGTTTCATGCATATTCCAAAAGAATGATAAGAATGAATGTAATTAAGAGTT TAAGACTGAGTATATTTTTTCC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_52515; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_76268
| Blastp | Probable aquaporin NIP5-1 from Arabidopsis with 80.93% of identity |
|---|---|
| Blastx | Probable aquaporin NIP5-1 from Arabidopsis with 80.97% of identity |
| Eggnog | Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response to abrupt changes in osmolarity (By similarity)(COG0580) |
| Kegg | Link to kegg annotations (AT4G10380) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019442036.1) |
| Pfam | Major intrinsic protein (PF00230.19) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |