Ll_transcript_76389

• Id Trinity: FTRINITY_DN55561_c3_g1_i1
• Name Transcript: Ll_transcript_76389
• Sequence: GTAAAAAATGTGTACTCTAGAAGAAGTTGAAATGTGGAATAATGTCAAGGTAAGAGTAAGATAGACTTTGAAACAGGGAAGATAGTCAAATATTACCGGT GGCGCCGGTCATCGGTTTATGAACCTTTCTCTCTCTCTCTTAAAGTCCTTCATGGGTTCTGAGTTTTCACCTTTCTTCTCTCTGATCTGAACAAAAATCT AAACTTTCTTCAATAATTCTACTTTTCAATTTCTGGGTTCTGCTTATTTTTCTAAGCTGGAAATGGCAACGCAACGTGCTCAAGTTCCGAAATTTGGCAA TTGGGAGAATGAAGGCAATGTTCCTTATACAGCTTATTTTGAGAAAGCCCGGAAAGGTCGACTTGGTACAAAGATGATTAATCCAAATGACCCCGAGGAA AATTTAGATTCGGTTATTGACAACGTTGACCCACCCCCTTCAAAACCTGGAGTTGATTCATATTCAGAGGATCCATCTGAAAATGGATCAACTGATGGCT TACCAAAGATAAGGGAGGATGCTGATCCTAAGCACTTCACTGATTCTCCAGCTCGTCAAAACAATGTAGGCAATAAGGGTGCCGGTGATTCCGCCCTTCG TTATGGAGGAGGTTCTGCTGATACCCGCAGAAGACCTTCAAGACAAAGTACTGGCTCTGACCACAGTGTTGAACGCTCGCCTCTTCATCGCCAGTCTAGA GCCCCAGGCAAGGATAGTCCCTCTTGGGAAAGAAAAAGTTCATATGAAAGCGGTCATGCCACACCAGGAAGGTCTCGATTAAGACCAGTTAATCGAGGCG ATGAAAGTCCTGATAGAGGTACTGCTCTTCCAAAGTTCGGGGAGTGGGATGAGAGTAACCCTGCAGCAGCCGATGGCTATACTCACATTTTCAACCAAGT GCGGGAGGAGAGACAGGTTGCTGCTGGAAATGCGCCAGGCACACCCAATGGAAGACCATATACTGTCAGGAACCAACCCGCCGACGACAAAGGCCAGGGT TGCTGTTTTTGGTGGAGCAGAAAATGATTTCTTGGAAGTGTTTATTATGTTGTAATCAGAAAAAGGAGATAAGAATAGTGTTGTGAATGGTAATGAGGTT GTGTGTAGCATTTGTAGATATTGAAGACTCTCTCCCTCCAAGAAGGAAATAGACTCAATCATGTGTTATCTTGTAAAGTGCCTAATGTGGAGGGGAAGAT TCATTCCTCTACTAGAAAACATCATTGAAATGCATTATCCTAAAGTTGTGCCTTTCTTTTCATCTTTCTATATTTTCTTTCGGGCAATAAAGACCGAGGT CGAGTCTCGACACAATAGTAAGGTTGTTGTAATTCAGTTAATATGTGTTTAGGTTGGCCTACGATATTTGTTATATATTTTTTCCAATTATTTGATAAGT GTGATTGTAGTCCTAGTTGTGTTCATATCTTGATCTACATGAGTTAAGTAGGTTCTTGAATGACTCCATATCTTATTCCAAATTGTCTCATTGACCTTTA TAATCCTTTCTATCATTCTTTAG
• Tissue: flowers
• Gene name: LI_gene_52549;
• Additional information: details;

Expression of Ll_transcript_76389

FPKM

• FPAB: 13.5
• FPNAB: 10.2
• LF1: 10.3
• LF2: 8.1
• LF3: 5.5
• LF4: 7.5
• UF1: 10.2
• UF2: 7.1
• UF3: 7.1
• UF4: 8.3

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_76389

• Blastp: RPM1-interacting protein 4 from Arabidopsis with 38.96% of identity
• Blastx: RPM1-interacting protein 4 from Arabidopsis with 38.96% of identity
• Eggnog: RPM1-interacting protein(ENOG410YR29)
• Kegg: Link to kegg annotations (AT3G25070)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019413018.1)
• Pfam: Cleavage site for pathogenic type III effector avirulence factor Avr (PF05627.10)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;