| Id Trinity | FTRINITY_DN55580_c2_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_76560 |
| Sequence | GTTTCTCTTTAAATTTTATCAAATATATCAAATAGAAAAACTTATGGCATTGCATGTTGAGTGTTGTTGATCAATTTATAAAGTTTGTATTATAATAGTG CTGCTGTTATGGGCATATCTTCTGAGTTCTACTATATTTTAATTCTGACATCAAATGTGTGATGTAATTAGTCCTAACATTTTATGCTGCATCAATATCT GAGTGATGAATATTACCAACTTGATGACAGGTTCCAAAGGATAACTGGAACCAATATAAACTACCTTCTGATGAACAACAATACTCTAGTGAGGTTGAGG TTGGTGGTAGTGTGGAGCCTTCAGAAGATGAACTTACTGATTTATCACGAGCTTGTGAAAAACTCTGGGATCTTGATTTAAATCGTTTGGTACCTGGCAA TGACTATGAAATTGACTGTGGTGAAGGGAAAAAGGTTTTCCAAAAGGATGATATGGCACAAGGAAGCTTGTTCACTTGGGTTAATGATGACGTATTCAGA AAGCCTACTTTTTCTCGGTTTCTTTCGCTTTTAGATAATTACAACCCACATCAAGGAAGTAAGGAAGTTGTCACCTCCGAAGAGAAGCAAGAGCAAGCCT CTTTCATAGAAGAAATCAGTAGAACAGCACCAATTAAATATCTTCACAAGTATCTTGCATCCAAGGGAATTGCTTCAGGGAGCTACCAAGATTTCAAAAG AATGATGACTAGTCTGTGGTTTGATCTTTATGGTCGTGGTGGAACTTCTGGTTCCTCTTCTGCCTTTGAACATGTTTTTGTTGGAGAAATTAAACAAAAC AATCAAGTTTCTGGCTTTCATAACTGGCTTCAGGTGAGACCCCCCGCTTCCTTTTTCTGCCTGTTAGGATCCATTTGGGTACGGGCAAACATTGTGGGTG GTGGAGGCAGTTGCCCTCACTGGAATTTAAACTTTTCTTAATATAATTATGTATTATTTGTGCAAATTTCCCCATGACATAGTAGTAATGTGTTATATTT ATTGAACCATAATCATCAAAGCCATCAAAAGCATAAGATGATTGAAGACAAAAGGATTAAAGTAGCTTAAAGTAAGCACAAATTTGTAGTTGTAATTTAG TGATGTATTAGTTGAAGGATAGGTTGTTGTTTTTATCCTTTTTAGTTTCTAGTCGATCACATGTAACTTGAGGTACTTAGTTGATTTAGTTGGTTAACAA GTTAGTTATCAGAGGGGCAATTGGTACCACCAAGGTATTGATCTAGTGGTGTAAGGTTCAATTTGATCCCTAGATAGACCAAAAAGTCAAAGGTTCGATT CTAGGGAGAAACACTTGTTGGAAGGGGCAGCCACACATCCCGAAGGGGTTCCTTACTCATAGGGTGTGGCATACCCTTGATTATACCCAAAAAAATGGGC AATTGGTTGCTTCCAAAACAAGTTACTTGGTTCATTGTATATATACCAATTCACTTGGCTGATTTCTTCAATAGAATGAATTCTACAATTTCCACAAACA CTTTCAATATTTTAATTCTACATGTTTATGTGTATGTTGCCCCTATAACTTAAAATTTCTGAATCCACAGCTTGATCTATTGGAAACTCATGCCAAATCG AAGGTGTATTAACTTATTGAATGTCAAATTTGTAGCTCTTCTCAGCCATCATTCTTATATTACTACCCTCACTGATCATGCAATTACTATATTGTGAATC TTCTTGCCCCAGCTAGTAGTATCGCAAACCTAGCTACTAGCTACATGTAGACTAGCTTCATAGTTGATATTGCTAATAATACTTTGCAGCGATCTTATGT TTTCAATAATTTTCCCAACCACCTGTTATATGTACAAGTCCTTATTCAGACCAGGTAGTTCCTTTTTTCCCTTAACCTTCTACCCTGCTTCTTTCTAATA ATATTATAGATGAAACTTAGGTGTTATTTTTAGGTATTTGTGATCCAATAAAAACATTACATGTATAACATCTCTTCCACATATTCTATATTGTATGTTT AATGGAAAACACCACCAAAAGCATCCCAAGAACAACACATAGGTTTTGTTATAATATTATGTATTCTAATTTGTGTAGTGATTGATCTATTAAATAAATA GATGTTGGGTTACATGGATATGTTTTGTTTCTTTAACTAGTAATATGAGTTTATCTTGTCATCGTGTGAAACTGTTATCTTACTGATGTATTTTGCAGTT TTACCATGAAGAAGCGAATGGGAGAGTTGATTATCAAGGCTATATCTTTCCCCGTCGGAGGGGAGAAATTGTGAGTTGATTATCAAAACACATTGAAAAT ACTTCCAACTAATTATTTTTTCTTCAAACTTATAATCATCATTTTGTTTCATCACAAACCTTTCTGTAAGTACTGTGTTAGTTTGTAGGTAAGCATTTGT TAATGATTTGGTCTGTGACCACATGATTTTTAATGATCTTTGCCACTGCAACTTGCAGCCGGACTCTGAAACGCAGCTTCTGACAATTCAGTTTGAATGG AATGGTGTTCTGAAATCTGTTTCAAGCACTTTGATTGGAGTTAGCCCTGAGTTTGAAGTTGCTTTGTATACCCTGTGTTTCTATGCTGGTGAAGAGGATA ATCAGATTCAGCTTGGTCCATATTCAGTTAATATCAAGTGCTATCATCTTGGAGATAGAATTGGATCTGTTTTCCCCATTTCAGATTCTTGAATTTTCAG TTTCTACATATGATTGTATTTGGAGTTAACACATGTATCTTTGAAAGACCTAAGTGATGATTAAGTCTTGTATTTGTGCCCAATAATTCATGTCTTATGT AAGCAATATCATTTAGTTTAATTATTACATGTTAGCACATTATTGAGAGAATTATGCACTTATTTGATGGCTCTGTCTAGTATAAAAAAATTCTTGTGCA ACATGTTTTGCTTTTCT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_52711; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_76560
| Blastp | Poly(U)-specific endoribonuclease-B from Danio with 44.35% of identity |
|---|---|
| Blastx | Poly(U)-specific endoribonuclease-B from Danio with 42.69% of identity |
| Eggnog | Poly(U)-specific(ENOG410XX8E) |
| Kegg | Link to kegg annotations (553584) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019446023.1) |
| Pfam | Endoribonuclease XendoU (PF09412.9) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |