| Id Trinity | FTRINITY_DN55580_c3_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_76570 |
| Sequence | GGAAAGATGATTTATGTAATGTGTAATTTAACCGAGAAACAATAGATGCGAGGAATAACAAAAAAATATATGGGAGGAAAGAGGGGTTATGATGTTGAAT TGGATGAAAGGCAAGATATGTATTAGTAATTTGCAAAAGTGTGGTGGAATAGAATTATAATTTATAAAATTGGGAAGCGGAAACCCTAGCTTAGAAAATG TGTGGTGAGGTGTGAAGTTTGTGTTGTTGTTGAAGATGTCGGTGATGCTGAAGAGGCTCTCAAATTCCAAATTACTGAAACTCATTTCTTCTTCTTCTTC TTCTTCACTTCCGTGCTTCTTCATTCCATCCCGGGGGCTCAGAGTCTCTGGTTCTGATGTTAGAGTGGGAAACGTAATTGAGAAACAGGGCCGCATTTAC GAGGTTCTTAAAGTAGATCACTCTCATGAAGGAAGAGGAAAAGCCACTGTGAAGGTGGAACTTCGTGATATTGCCCACGGAAACAAGGCTATACAACGGA TTGCTACTGATGAGGATATTGAAAGGGTCTATGTTCAGGAAAAGAGTTTTATGTATATGTGCACCGACCAGGATGGAACCGTAGTATTAATGGACTCTAC TACATTCGATCAAATTGAAGTTTCCTTAGACTTGTTCGGCAAGAATTCTTCATATCTACAAGGTGGATAAAAGCTACCATCATTGCTATTATATCCACCA TTCAATTGATGCATAACTAATGTCATACACTACTGTGCCATTGGTGCCATTTTCTCATTTGTGTCTTCATGAATCCCTCCCCCACACTTTTTTTCTTCTA GGGTCCATGTTCGTAACTGTATTATCCTCCTTTCTCACAGTATTTTCTCCCCCGTCCTCTCTAATAAATAAAACAACTTTATTAGAAATATTATTCAACC CTCTCATAACTGTAGCAATTAAGTTTCATTAGTTCAATCGTCCTTTCTTTTGATAGTTATTTTTCATTTTATTGCCTGATTAACAGATGGAATGAAAGTT AAGGTGCAATTTTATGATGACAAGCCTTTTTCTGCTTCTGTTCCAAAACGTGTAACATGTATTGTCAAAAAAGAGATTGCAGCCACTCCAAGGAATAAAA AGGTTGTACTGGAGAATGGTGGCCTTACAGTTGAAGTTCCTCCTCACATTGTAGCTGGTGATGCTATAGTTGTTAGTACAGAGAATGACTCTTACTTGGA AAGGGCTAAAGCATAGTGTGACTCAGGCTTGGATATGAGCCGAGACCAGTAGACCACCTGTGTGATAGAAACAAACATCCAATTTTGAATTGTCATTTTT TAACATCCCTTGATAAGTTCGGTTGTCTTCTTGCTGGATTCTGTGTTTTGACAATTCTGAATTCCATTTAGACAGTTACTTCGGTTTCTGTTATCAAATT TTAATAATGTAATGTCCTCGATCCTTTACAGTCGTGATAAGTCACCACTAACTATAAAGTCAAGTCTTAAGTATATTTTTGACTAACTACATAAATTACA CAGAATGAATTTGGCCACAAGAACACAGTTTTCTATTCATTTCAGGTGAGATATATAACTAAAACTTAACCGATTCTTATAAATATATTATAAATAACAC AATGAATATTAGTTTGCCACAAGAGCATTGCCCTCTATGAAGGAAGGGAAAGGGAAACAACGAGAGCTAGTTAGTTGTGTATTTATACTCTTGGAATTTT TTATTTAACTTTTTAAAGAAAAAAACATGGGAAGAATGCTAGTTTGTAAATAAATTGAAGTTGTATGTTCTTTCATAGAGATGGCAAAATGAGCATTTCT TGCGGACTTGCCCATACTGCCTGTAAAATGGGTATAACATGTAGATGTGTCTGTTAAGGAAAAGTGGGCATGCCCACTCCTACTTCAATTTTGCTGGCTC AGGCTAAATAGTTAGGACAGCTTGTTTTGTCATCTCTATTTTTTGTGTACATTTTATTTTCACTACAACCTAGCAATTTTTGAGTGGGAAAATTCACTTT TTTTTTGCAATTAAGAAGGTAAATATGACAATACATTTGAATGCAAATTAACAAAAAATTGAGACGTGTAACATTTGTATGATTATGCAAAAATCATCAT GTATTTATCTTTCCATCTAAATTCCATTGGGGACAATATTAGCTACAAAAGCAGCATTTGGATGGAAAGATAAGATAAGTATGTATTTAGCCGAATGTTT TAAGCAATGCAAAAAACGGGAATAATATCGAATTTGTGTGGCTGATCCCTGCACACGTTTCATCGCAATTGTGTGGCATCCACCGTGGAAGCACGCCTAC CTTTGTTGTTCTTCATTTAATTGAATTGCAACAGCCTAATGTCCTAAACTCCTAACCCATCCATCATGTCAGCAGCAACAGCAGCATCATCGTTTATCAT CACAACTCTCCGTCCTTCTCATCCTCCTTGGCATTCCTCAATTTATAATCACATTTACTCATCTCCCAAATCCAACTCCAACTCCAACTCAAAGGGTATA TTTGTTGCTACTGCTGTTACCCATAATAACAATAACGAACTCAGTCTTTCCTCTTCTGCGTATAATAGTCCATCAAGTATCACGGATGATCTTGGTGATG TCACAATTTTCCGGGCTTCCGGCGAGCCCGTGACCTTGAAAAGTCTTATGTGGGATGAAGCAGTAGAAGAGGGTTTAACTGTGGTGGCCTTACTGAGGCA CTTTGGATGCCCTTGCTGTTGGGAATTGGCTTCAACCTTGAAAGAATCCAAAGCAAGGTTTGATTCAGCTGGTGTCAAACTCATTGCTATTGGTGTTGGT ACTCCCACTAAAGCCCGTATCCTTGCTCAACGTTTACCATTTCCAATGGATTGTCTCTATGCAGATCCTGACCGCAAGGCATATAATGTTTTGAACCTCT ATTACGGATTCGGCCGTACCTTCTTCAACCCAGCTAGTGCAAAGGTGTTTTCAAGATTTGATGCTCTTCAGAAAGCTGTGAAGAACTATACAATTGAAGC CACTCCAGATGATACAAGTGGCGTGTTGCAGCAGGGTGGGATGTTTGTATTTAGAGGCAAGCAGCTTTTGTATGGAAGGAAAGATGAAGGGACAGGTGAC CATGCCCCCCTAGATGATATTTTTGATGTCTGCTGCAAAGCTCCTCTTGCCTAAAACTATACTTCACAAAATTTTAAATTTAACATGTGTTACTACAAGC CAGTAGTAATCTTATACATGCCTACATAATATAAGTTATGAATATGATTAAGAATTATACAAAAATATTCTCAAATTCACTCATGTTAATACGCCAAGTT AAATTATATAAGTAGATCATTTTTCTCAAATTTGAAGTAAACATAAGCCAATAGATATAAAAATATTTATAAAATTAAACAAAATACTACACGTATCATA CTTTTACTGAGTAAAGAAAATAAATTATCTCCTCATATGAGGAGATACATTCTTCTCAATAGATGAAAGAGAATAATGTATCTCCTCATATCAGAAGATA ATTTATCTCCTCATATGACATGTGT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_52713; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_76570
| Blastp | Thioredoxin-like protein AAED1, chloroplastic from Arabidopsis with 30.15% of identity |
|---|---|
| Blastx | Elongation factor P from Ruegeria with 37.84% of identity |
| Eggnog | AhpC/TSA family(ENOG410XVW9) |
| Kegg | Link to kegg annotations (AT2G37240) |
| CantataDB | Link to cantataDB annotations (CNT0002107) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019415339.1) |
| Pfam | AhpC/TSA family (PF00578.20) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |