Id Trinity | FTRINITY_DN55591_c2_g5_i1 |
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Name Transcript | Ll_transcript_75446 |
Sequence | AAACAACAACATTGACCCTTCTCTTCCGTTATAGAAAAGGCCAAAGATCAAATATTTCTCTCTCTCTCGAATTTTCTATCCGTCGTCTGCTTCACAGATT AGGGTTCTTCTGAATCTTCATATTCTTTGAATTCGATTCCAATATTGAAGTTATGGATTCTGATTCAATCACTATTGTCACTCCCATTCCTTCTTCCACG AGCGCTAAAAACCTTGGCAAAAAGAAAAAGATTAACAGGTCTGCTAAATTAAAGCAAAATAAGTTTGTTGTGCGTCGTCAACAGTGGCTATCTCAAGGTA TGTTATCCTCTCTCTCTCTATATATATACATACTATGATTATTCTTTTAATGTGCATATCAAGGTTTAGATTGATTGATTTATTAAATTTTATTTTTGAT GAATTGTTTTCTGTGTATTATGAATTTTTCGGATTGGTGGTTTGGTCAGTTACGGTGAAGAATAATGGGTGCAAGGATGGAGAGGACGACGGTAGCCTGC CGCCACTGCTTGCTGAGAAACACAAGGAACATCTATTGGAGGAATTGGAGACAAATCGGGGTAGAGACCAAGAGGGCAATGAATTGGTGATTCATCAAGA CAATTATTGGGAATCACCCACCAACAGTCCCACGAGTGATGTTTCTGGGACAAATTTCAGCGGAAGTAGTAGCAGCAGAAGCAGTAGTTCTAGTAGTGCA TGGTACTGCTCCGGGAATATCACAGCAGAAGATGAAGAAGAAGAAGAAGAGGAAGAAGAAGATTGCTTGGATGATTGGGAGGTTGTGGCAGATGCTTTAG CTGCCAATGACAAGCAGCAGCATCTAAACAATTGTATAGATTCGCCCCCTCAACCCATTGTGCAAATGGTATCGCCCGATGGGTTGAATTCAGGAGCTGC GAAACTAGAGAGTGGTAGATTGGTTCCTTTGGCATCCGGCTACAACCGAGCTTGGAGGGCTGATGATGCTTATCGCCCTCAGAGCTTGCCCAGTTTATCT AAGCAGCTGAGTATGCCAAACCCATATAGGTATTGCGGAGGAGGGTCACCGTGGACTCGCCCTATGATGCTATCTTCATGCCCAATATGTTGTGAGGATC TTGATTTGACAGACTCAAGTTTTTTGCCTTGTCTGTGTGGGTTTCGGCTTTGTCTCTTTTGCCACAAGAGGATCCTTGAGGACGATGGTCGCTGTCCTGG GTGCAGGAAGCCCTATGAGTATGAACCTGTTGAGACAGAGGCAAAGGTGGCTGGTGGCAGCCTCACTATTTGCTTGGCTCGGTCATGTAGCTTGATTGAA AGGTCTTAATAGAACTATGTTTTCACATTCTTGTGCATGACACTGTATCTTCTTTTGTTATCGTGCATCCTGTCTTTAGATCGAAATGTCTAATTTTTTT CATAGGTCTAGTTGGTGTAGGGTGATGATGATCGGTTTTTACACACCTTGGAGTTGAGTTGTTTCTCATTTGATCTATGAAGTACTTGTTTATGTAGATT ATTCATGTTGGTATGTGAGTACATAAAGTGGTATAGAAATTCAAAATTCAATAATTGATTATGGTTATATAACGGTGTGGCGGATATGGCTGTACTTCCA CTTCTTCACTTTAATTGAGCATACTCGTATTTTTATTTTTATGGATTGATTTTTGCTCTTGTTGCATTGATGTATATGGGTTCTCTCTTTTACATTTATG GTGATTGCATTTTGAG BLAST |
Tissue | flowers |
Gene name | LI_gene_52796; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_75446
Blastp | Putative general negative regulator of transcription C16C9.04c from Schizosaccharomyces with 50.94% of identity |
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Blastx | Putative general negative regulator of transcription C16C9.04c from Schizosaccharomyces with 50.94% of identity |
Eggnog | - |
Kegg | Link to kegg annotations (SPAC16C9.04c) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019462486.1) |
Pfam | RING/Ubox like zinc-binding domain (PF14570.5) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |