| Id Trinity | FTRINITY_DN55591_c3_g1_i12 |
|---|---|
| Name Transcript | Ll_transcript_75474 |
| Sequence | CTTTTCTCTCTTTTTCCAACTTTTTCTTTCCCTTCTATCTTCTTTTTATTTTTCTCATCTCAGACCTAATTCTCTCTCTTTCTCTTTTCATCCAATATCA CTCACAACCTAGCTAGAGAAGAAGATCCCTCTAAGTTTAGTGGGTTTTTCTCATCTCTATCACCTAGATCTGTGTCTTGCTATGCACTCATTGTAAAACA AGAACAGAAGGAGAAGTTTTGCTATATATATATTATATATAGTAGCTGAGTGTATATAGTAAGAGAAGATTTTGAATAAGAAGATCAAAATGACTCCAAT TAATTTGGCAGGGCAGTTCGGTGACACGACATACACAAAAGTGTTTGTTGGAGGGTTGGCTTGGGAGACTCAGAAAGAGACTATGAACAAGTATTTTGAG CAGTTTGGTGAGATCTTGGAGGCCGTTGTCATCACTGATAAAGCCACTGGAAGATCTAAAGGCTATGGATTTGTTACTTTCCGTGAACCAGATGCTGCCA TGAGAGCTTGTGTCGATGCTTCTCCCGTAATCGATGGCCGTAGAGCTAACTGCAACCTTGCTTCTTTGGGTGTACAGAGATCTAAGCCTTCAACCCCAAA GCATGGAGGAGGTGGCAGGAACTTTAGGGTAATGGGTTCTTTCCAGACAGGGTTTGGAGGTGGAGGAGTGGGGTCAGCTTTTGCTTCAGCACCAACCTTC CCCCATTATGCCATCCAGCAAGGGATGCCTTATAATCTTTATGGGTATTCTCCTTACTCGACGGATTACACTTACCCTACGAGCTACTACAGTGTGTATG GAGGAGCAACAGGAGGAGGAGTACAGTACCCAGTTTATGGAAGTGGAGGAATGATGACGGGTGGTGGTGGTGGCGGTGGTGCAGCATTCTACCCATATGT TCAGTACGGTGGAGATGGGAGTAGCGGTGGTTATACTAGTTCAGGAGGACAAGGTGGTTATGGTGCTGTGAGCTACCAGCCACACCTATTGCAGTATTCT CATATTGCTGCTGCTTCAACTGCTGCACATGGTGGTTATGCTCAGCACTATGCAACACCCATCTCTCTTCCACCTTCCCCTGCAATACAATCAGTGTGTT TTGCTGTGCCCCAGGCGTGACAGTGGCTCTTCAACCTCTAATTCCTCATCGCTAGACCCTCATATTCTCCTAAGATTGTTCAAGTCACTCCTTTGGCCTA ACCATGGTTCTCTCCCTCTCCCTCTCTCTCTCTCACACACACACACACACACACTCTTTCACTAACACAGAAAACAAAGTCCATCATTTGCATTTGGACT TTTGCACAAGGCCCTCCGTAGGGGCTACAATTAAAGTTCCTCCAAATTTGGAGACTCATGCATGAAAAAAAGTTGCATTTTCTTGAATGAAAGGCTTGGT TTTTCTAAAGAGAACCAAAAATGTATATCTTTCACCAACACAAGCTATAGGAAATAGCTAAGTTGGAAAAAGAATTGCAAATTAGTCCAGGGAAGGCTAA GCCAAAGAAAACCATCTTTTTAACTTCAGCCTAAGAAGGGCCAAGTAAAAAAGTAAAGAATGGTTTTGAAAAATTGTAAATTGGAGATCACGGATCATAG GTTAGGT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_52798; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_75474
| Blastp | Probable RNA-binding protein ARP1 from Arabidopsis with 64.29% of identity |
|---|---|
| Blastx | Probable RNA-binding protein ARP1 from Arabidopsis with 63.37% of identity |
| Eggnog | RNA binding motif protein(ENOG4111PGT) |
| Kegg | Link to kegg annotations (AT3G54770) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_014494038.1) |
| Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (PF00076.21) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |