Id Trinity | FTRINITY_DN55596_c0_g2_i1 |
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Name Transcript | Ll_transcript_76197 |
Sequence | GGCGTTAATAAAGAAGAAGCGACTCTGTAAAAAGCGTAGCTTTGCTGATAAAAAGTTCAAATAGACAGCCACAGAGACATAAAGAGTCACAAAGAGTTCT ACAAATTACGCTATTCCTCCCCCTTGTGTTTATTATCGTACTCTGTCTTCGATTTTCGATTCAGGTCACAATTATTATGTCTTCTCTTTCTTTTGTTTCA GTCTTTTCAAAACCCTTTTATCATCATCTTACTATTCTTATTGTAGGGAACAGTTTAAGAGTGTGTGGATCGGTAAAACAATCTCTGAGGTGGTCGTGAA GTAATGGAGTCTCATGACGAGACAGGATGCCAGGCACAAGAGCGTCCCATACTTTGCGTTAACAATTGTGGCTTCTTCGGAAGGGCTGCTACCATGAACA TGTGTTCCAAGTGCTACAAGGACATGCTGCTGAAGCAGGAGCAGGACAAACTTGCTGCATCATCGGTTGAAAACATTGTGAACGGAACATCCAATGGCAA CGGAAAACAGGTTGTGAAATCAGCTGCCATTGATGTACAAGTTGAAACTGTGGAGGTCAAGACAATCTGCGCTGAGATTTCTGCTGATTCGTCCTCTGGT GAGAGTTTGCAAAACAAAGCCAAGACAGGTCCCAGCCGATGCGCCACTTGCAAGAAGCGTGTCGGGCTAACTGGTTTCAGCTGCAAATGTGGAAACCTCT TCTGTGCAATGCATCGCTATTCCGATAAACATGATTGCCAATTTGATTATAGGACTGCCGGGCAGGATGCTATAGCTAAAGCCAACCCCATAATTAAGGC CGATAAGCTTGACAAAATATAGGCTTGAACTAAAGTACAAAGCTTGAAGCTTCGTCTTATATCAGCAAGTCGACGATCATATATATAGACTGCTTGGCTT TTTAGGTGTCCTTTAGTGATTAAAATGGTCAATGTCATGGTCAAAGGACATATTTTATGTAAAACTTTCACTCCTTGTTGATTGGTGAGATTCACTTGTT AGCTCCGGTGTGAGTGTTTGTGCTTGTTTGATGAACTCCTTTTGTAATTTGACTTGTGATTGATCTGCATTTTTTCTTCTTCCATGTTGCATGAACTGTA TCCCTGCTTAGTTTTTCTGTGCTCTTGTTATTGAATTGTTTTAATAATGTTTAATTTGTTTCCTGTGACTACCCAATTTCGTTCAGGGTCTTTTTAGAAT GTTCGGCCGAAAATCGGGGCGAGATATTTTGTATGCACAAATTTTGTGAAGGAAGTTTGAAACTTCTGGCAGAACTATTTTATTGATTTGCTCCACTCTA ATGTTAGTGTTGGATAATGCTATATAAACAAGACATTGTC BLAST |
Tissue | flowers |
Gene name | LI_gene_52829; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_76197
Blastp | Zinc finger A20 and AN1 domain-containing stress-associated protein 8 from Oryza sativa with 64.91% of identity |
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Blastx | Zinc finger A20 and AN1 domain-containing stress-associated protein 8 from Oryza sativa with 64.91% of identity |
Eggnog | zinc finger(ENOG4111UWC) |
Kegg | Link to kegg annotations (4341520) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019444112.1) |
Pfam | A20-like zinc finger (PF01754.15) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |