| Id Trinity | FTRINITY_DN55597_c1_g1_i6 |
|---|---|
| Name Transcript | Ll_transcript_77177 |
| Sequence | AAGCATTTGAATATCATAGAAAATTATTTTATGCCTTTCAAACATAAAATCCACGGATTTAATTAAGGAAGGGGAATTGAGGGCGCGAAATGGAACGGCA AAGTGGAAGAAAAAAAGATTGACCTAATTTAATTTAATTTCCGGTATGATGAATAGATGAGTATTAGTAGAAATGTTAAAACCCTAAGTAGTGGACAACA CATATCAATGGCGAAGAGTAGAGAGGAACTACTGGAGCGGTGGAGGAGCATTGCGGAAGAAGAAGAAGAAGATAACGATGACGTCAATGATCCCTCTCAT TTTCATCGCCTCCACCGTCAAAAAGAACAATGGTTTGCAGATGCATACAATTTTGTAATTTCTTTGCCAACTCAAACTCATATTTGGTGTGGCTTTTGGG ATCTAATGGGTCCCCTTTTGGAGACTTTTTACAATTACTTCAAAGATGACCGTCAAGATTCACCTCTCAGGCTTTTATGGAAGAGAATCTCCAATGAAAT GCGCCATTGCTTGCAATGTACTTCTCACCATCATCAAGCCCAACAAATGTATACTATGGAGTATGAATCCGACTCTGTTGGTCCTCTTCTTGAAGTCTTG CAAAAGCTTGATAACGAGAGGGTCACATCACACCTCAGAGACATCAATACAAAAATAGCAGGGGAAGGATATGACCCTGCTTCTGATAATGCCCAAGTTG TTAATGTTTTGTATGAGGTATTGATGTTCCCAATCCTCTTAGATTCTCAGCCTCTATTCACTGAGTTTGAGTTATTTGTCGAAGCTATTGACAATAAACA TGAATTGGCTTTGTCTGGGAATCAACAACTTCCGGGAGTTTATGCATTACTCTTTTGCAAGAGAAGTGTGCGTTCTGTTGGATATCGCTTAGCAGGATCA ATGGGAAAACTGAGGAGAGCAATAGACTTGGAACCTTTGCAGCCATTACTTAAGAAATTTATTGGCTGTTTAGAGGCAGATGCTTTACCATCGGCACTGG AGACTTCAGCAAGAGTCCAGCTGGATCGTGTGTCTTTATGGATCGGCATTAAATCACTGCTTGGCTTCTTGGACCCTCCAACTTTTGAAGAAGGGATATT GGAGCGCTATCCCTTTTTTCTTGATATTGTACTCAATCATATTAGTGGTGATTCACTTGAATTTTCCCATGCTGTTACTTGCTTGAGACTACTCTTTGAA ATGCTTGGCTGTAAGCTTTGGTTAAGGTCTACATTGTCACCAAGTGTAATGCGCAACACTCTCCTTGTCTCTTGAAGCTTTGCAAGACGGGGAGCATGAA AAGCAACGGAGGCATTTTCTCTATTTCCTCCTTCATCAAGTGCCAGTGAGCAGTAACTTCAGCATTCTAATAAGAAAGTTGTCATGCCAGATAGCGCTTC TTGTTGTACACCGAGGATACAAGATGAACCCACCTTGCCCACCTTCTGAGTGTGCACATATGTGGGGACCTGCCCTCGTGAAATCTCTGAAGGACTCCTC GCTTCACAATTCTTTGAGGCAACCTGCTTTTGACCTTATACAGACTATCATAGTATCGGATGCTACTGCTTTAATTTATTCGGTGCTGAATTGCTGCACA ACTCCAACCATTGGTAATAGCATGGCATATGAGGTCATTGAGTTGGATGATGAAAATGATGATACTTGGCTGCCATCTATTCCTGATGGTGAAGAGAAGG ATAGTAGTAGTTCTTGGAGTGAATTCAGTGTGCAGAGTGTAATAACATCTCGAGAGTGCCGAGAATGGATGTGCATTCCAATGCTATGGTTTGATGTTTT AGTTGATATCAATCCCTCAGTCCTTCCAGTATCATTTTCCAAGGCTGTTTTCTGGGCACGATCTCGTTTTCCTATGGTAGAACTTGAGAATAGTGCAGAA ACAGTGCTTCCAGTCAGATCTTACCTATCATCTTATGCTGCAGAAATTTCCTCTTCATTTGGCTGGAAGGTTCCAACTGGAGCTGATGATGGTGGAGGGA ACAAATCAAATAACTCAGTTGAAGTGTTGACTATGTCTTCTCCTTTAATAAGAACATTTAACAGGTTAACTGCACATTTTTTAGCTCAGATGGGACAAGG AGAGCTTCGAAGTCAGTGGACTTGGGAACCATTAATGAGTGAAAGCTTGATCCTTTCGCTTTTGGATCCAAATGATGATGTTAGGCAGTTTGGAAAGTCT ATGTTGGAACAAATTTCAGATACCCGTGGTCTTTCATATGGATTGAAGTTTCTTTATTCTCACAAACTCTCATTGTATGCAACTATGTTAGGCCTCAAAC ATGCTTTGAAACTGGTCCAATTGGATTCTGTTCTGTTGAAGTTTCATGCTCTACATCATTTTTGGTTTCTTTTATGCAAATTACTAAAAGATGGGGATCC ACCTGCTTCAGAGTCGCTTGAAAATACACATGGTGGAAAGGTGCCGGAATTCTCTTCACAAGGCGGGTTTCTCAAGCAGCCGGCTTTTGATTCTCTACCT CTGGGTATTGATAAACAAGTTTCTGATGCTGAAAAAAAAACAAAGGAGAAATTTTGTTGCTTAATATCTGAAATGGCATGGCCTATTTTTTGTATGTGCC TTGTAAAAGGAAAGGAGTTTATTGATTTCAATTTTTGCCAGATGACTTGTGTTCGGTTACTCGAGATTCTCCCTGTTCTTGTTGATAAGCTCCATCTATT TGTTGGTAAAGAGCTTGTGAATTTCACAATGCTGGTAAAAAAGAAGTTGGATTTCAAATGGCTTCATGATCTCATAGAATGGAGAAAGTCATCACTTGAA GTTGTTATTGTTTATTGGAAGCGAGCAGTTACTTATTTACTGAACCTGTTCAAGGGTTCTTGTGATAAAAGTTCTGTGTCGATAATCGCGACCATTGAGA ATATTATTTCAAGTGATGGCTATCCTTTAGAAGAATTGGCGGAACAAGTGTCTCGCCTGTCTGTTTCTTTATCTGGGGAAGATTCTCGTAATTTTCAGGA GGCAAATATGAAACCCAAGTCATCAGTATCTGAAAGGTTGTATTTTGAGAAGAACTGTTTTACTTCAGATATGCGTTTTTCATCCGTTGAGGATAAAGGA GTACAAATTGTAGACTCTAAAATGATGACTGCCAAAAAAGACTCTGAAAATGTAGTTATTCTTTTAGATGATGAAGAGGATCCAATTGAGGATAAAGGAG TACAAATTGTAGACTCTAAAATGATGACTGCCAAAAAAGACTCTGAAAATGTAATTCTTTTAGATGATGAGGAGGATCCAAATGAATTTCCTATGGTCAT TTTATCAGATATTAAGACAGGCCGCCACATGTCTGATGGCAAGTCAATGTCCTGTGATGCGGGTAAAACTTCACCAGCTTCTGGCCTTGCAAAACAGAAT GTTTCTTACTTGAAAACTTCCAAGGAAATGGAGTCAACCTCCCAGAAAAAGGCAACTAGTGATGATTTCAAAATTTCTTCTCAGAAACCGGACTCTGGTA ATATGCACGATAAACCTGTTATCCCTTCGTTTACCAATTCCAAAGAAAGCCTAGGCATTCGTAACAGCAAAGAAACTAGCTCAAAATCTGGCGATAGGGT GAATTTGTCAAATTTTTCTGATGAGTATAATAATGCTAAAAATTTTAAGAAAGCTTGCAGCATTGCCACTTCTAAAGCTGGTGTCTCAAGCAATATTAGT AAAACGTCAAGTGAGTTTCAGGAGGCTGTAGTTAATCGGGTAGAGACTGCTCTGAAATCTGTGGGATGTGTCCAGTTGCATGCACCAAAGCCTACTTCCG TTTTAAGAAGGCAAGTTATTCAACTCAAAACACCTTTTGAAAACAGATCCAACTCTCTCCGTAAAGTAGAGGACCCATTGAAAAGATTCAAGCCACCAAG GTTGGATGATTGGTATAAACCTATTCTTGAAATAAATTATTTTGTGACAGTGGGGTTGTCATCCCAAAGAAAAGATGAAAACCAAACTGTTAGCAAATTA AAAGAAGTTCCTGTACATTTTCAATCACCTGAGCAGTATGTGGAGATATTTCGGCCATTGGTTTTGGAGGAGTTTAGAGCACAGCTACAAAATTCTTTTA TTGAGATGTCCTCATGGGAGGAGATGTTTTATGGAAGCCTTTCTGTGATGTCAGTGGAGAGAATTGATGATTTTCATCTTGTTCGTTTTGTCCATGATGA TGGTGATTCTGCAACGGGTAAGAGCTTTTCAGAAAATGATCTTCTTTTGCTAACAAAAGATCCTCCACAAAAAACGTCTCAAGATGTTCATATGGTTGGA AAGGTTGAAAGGCGTGAGAAAGGCAATAAAAGAAGTTTAAATATTGTTCTTATCAAGTTCTATTTTCAAAATGGCTCTTCACGTTTAAATCAAGCTAGGA GGAATCTCAATGAACGGAGTAAATGGCATGCATGCCGTATAATGAGCATTACCTCACATATTCGGGAGTTTCAGGCATTGTCATCAGTAAAAGCTATCCC CTTACTCCCGCTCATTTTAAATCCTGTGAAGGATTCCATTCATCTTAATGGCTCTAAAGAAGTAGATCTCATCAAGTTGAGCCAGCCATTGCAGCAAACT CTGAGGTCGTCATTTAATGTCTGTCAGCTTCAAGCAATTAGTGTTGCTATTGGAAGGGCTAAACCAAAGAAAAATGTTGAATTATCTCTTATTCAGGGTC CTCCAGGAACTGGGAAAACACGAACTATCGTTGCAATTGTCAGTGCCCTTCTAGCTGCTCCTTCACAGAAGGTGAATTGTCTAAAAAATATTTCAGATGA AAATTTGAACCGTCATTCTTTATCTTCCTCTTCAAGACCAAAGATTAGCCAGAGTGCTGCTATTGCAAGGGCATGGCAGGATGCAGCCTTGGCTAGACAA TTGAGTGATGATGTCCAAAGTTCATCAAAATCTTTTGGAAATTGTGTGAAACAAAGAGTTCTTATCTGTGCTCAATCTAATGCTGCAGTGGATGAGTTGG TGTCAAGAATTTCTAGCCATGGTCTCTATGGCAATGATGGGAAAATGTACAAGCCCTATCTTGTGCGGGTTGGAAATGTAAAAACTGTCCATCCGAATTC ATTGCCATTCTTTATTGATACTCTTGTTGACCAACGTGTTGCAGAAGAGAGGATGCATGTGCATGATGGGAAGAATGACTCGAGGGTAGATTCTTCAGTG GTGCTGCGGTCTAATTTAGAGAAATTAGTTGATTCTATTAGATTCTATGAAGCTAAACGTGCCAACTTAATGGATGGAAATGCTAATGTTAAAACTCATC TTCATGATGACTCTCACTTGGAGGATGAGAAGGAATTGTCTGATGCAGAAATTGAATTGAAGTTACGTAAATTCCATGAACAGAAAAGACAAATATATAA AGATCTTACTAATGTTCAGGCTCAAGAGAAAAAAGCCAATGATGAAACCTGGAATCTTAGAAATAAGCTGCGGAAATCTATATTGAGGGAAGCTGAAATA GTAGTAACTACATTAAGTGGTTGTGGTGGGGACCTTTTTGGAGTTTGCTCTGAAACAATGTTAAGTTCCAAGTTTGGGGGTCCATCTGAACATACTCTGT TTGACGCTGTTGTAATTGATGAAGCTTCCCAAGCTCTTGAACCTGCTACTCTGATTCCTCTTCAGCTTTTAAAGTCAATTGGAACCAAATGCATTATGGT TGGTGATCCAAAGCAGCTGCCTGCAACTGTCATCTCAAATGTTGCTAGTAAATTTCTTTATGAATGCAGTATGTTTGAACGTTTACAAAGGGCTGGGCAT CCTGTGATTATGCTTACTGAACAGTATAGAATGCATCCAGATATATGCAAGTTTCCTTCATTGCATTTTTATGACAATAAGTTACTGAATGGCTGCCAAA TGTCGAGCAAATCAGCACCATTTCATCAGACCAAGGGTCTCGGACCTTATGTATTCTATGATGTCATTGACGGTCTGGAAGTTCATGGGAAAAACTCTGG TGGAATGTCGCTTTGTAATGAGCATGAGGCTGATGCTGCAGTTGAAGTACTAAGGTTTCTCAAGAGAAGGTACCCAACTGAATATAATGGTTGTAGAATT GGTGTTATTACTCCATACAAGTGTCAACTTTCTCTTCTGAGATCTCATTTTCTTCATGCATTTGGATCTTCGAACGTATCTGAAATTGAATTTAATACTG TGGATGGTTTCCAAGGTCGAGAGGTGGATATTTTGTTACTATCTACTGTAAGAGCTACTCATTCAACCACTGCTGCATCTGAAGTCAAATCCAGCACTAT TGGATTTGTTGCTGATGTAAGACGGATGAATGTTGCCTTGACAAGGGCCAAATTATCACTTTGGATTTTTGGTAATGCAAGGACATTACAGACAAACCCT GACTGGGCTGCTCTTCTGAAGGATGCTAAAGAAAGAAACATGATCATATCAGCTAAGATGCCATATCATTCAATATTTAAAACAGCTGAAAATAAGTGCC GTGTTCAAAATCCCGATAAGCATGTAAGACCATTACAGCATGAGAAAAAGGCTAAGGATAGTTGCCAGAACGGAGCAAAAAAATTGGGTAATGACAAGTG TACTTTTGAGAGAAAAAGGAAATGCATTTCTTCTGACGTCAAGGACAGGAATAAGGGTAATAGAGATGAGAGAGCTATTTCACCTTTAGGAAAAGATGTT CCATTTCAGGGAAGCAATTCCGAAGAACATATTTCCATCAAGGACACAGCATATCTTGTTGCAACACATGAAAACAGAAGCTCCTGTTATCAACAGGTTA GTAACAGTGGAAGAGAATGCAGGGATAAAATGAAAAATTCGGGTAGGACAACATTGGGTAAGAGGCTGTCAAAATTTCAGAATTCAGGAAATAATTTAGA CCATTCAGTGGAAGAGACAGATGATAGGCATAAGGCATCAAAACCTGAGTCAAAAAGACCAACTATGTGTTCTGGAGCAGATAGGAGCAGTCGTTGTAAA GATGTTTCTGCTCCCTCAATAGGCTGTCACAAAGGTAGTGAAGCGGATGATCAAAGTAAAGCTCCTACTCAAAGTAAAGTTTCTGGAATTTCAAAAAGGA AACGGCATCGTGAAGCTGTAGAGTTGGAAAGAACAACTGCGAATTATGGAGCAGATAGGAGCAGTAGTTCAAAAGAAGCGAATGCTCCCTCAAAAGGGAG AGATGTGGCTTCTGAAATATCAAAAAGGAAGCAACAGCGTGAAGCTGTTGATGCTATTCTTTCCTCATCTTTGTTATCTACTAAGAAAGATGAATCCTTA GCAAAAGCTTCTGCAAAAAAGCGCATTTCCTCATCTGTTGGGAAGGGGAGTATGAAACCACCCAAGACAAGAAATGTGAGATCAAATGAATGAGCCGGGA GTAAGGAAGAACCAAATTTGCATTGGTCCTGTAATAATCACCTTTTTGGCATGGCCTTGTTTCAACATTTTTTGCTGCTCGGTGCTGCTTTCCCATCTGA TATAATGGAATCGATTGGAGAGTAGAATTTTGTTCACTGGAAACAACTGATTTAATATGATGCAATGGATGTTGGCTATGATGACAATAGTTAATTTTTT GTATAATAATGGTGTAAAGGCGAAATTTTTTGTTCATAATGTATACTTTCATTATATCGTATTTTATTTTATAAATTAATTTCTTTTGGCAGTTTAAATG ATAATCGAGTTAAATATAATâBLAST |
| Tissue | flowers |
| Gene name | LI_gene_52833; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_77177
| Blastp | Helicase SEN1 from Saccharomyces with 30.79% of identity |
|---|---|
| Blastx | Helicase SEN1 from Saccharomyces with 30.18% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (YLR430W) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019447624.1) |
| Pfam | AAA domain (PF13086.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |