| Id Trinity | FTRINITY_DN55608_c1_g1_i13 |
|---|---|
| Name Transcript | Ll_transcript_126789 |
| Sequence | ACCAAAGTGTGAACATGAGAGTATGTAAAAGTAGAGTAACAGAAATAGCCTAAAAAGCCTGCGTTCATTTCTCTCATCTCTTTCCCATTTTCGTCGCTAT CTCTCTCTCTTTCTCTACACCTTCCCAAACCAAACACTTTCATCTCATTTTCTCAAAAAACCATAACTCGTTTTCATGGCTCACCATCAACTCATCGACT CGCTCACTTCTCACATTTCTCTTTACCATTCTTCCATTTCAATTTCCCAATCCTCTAACCCTAACCCTAACCCTAACCCACGATCTTCAATTCTCAAATG GTTCTCTTCTCTCACGATCCACCAGCGCCAATCTCATCTCACCATAATTGATCCTACCTTCCTTCAAATCCTTCTCCAAATGCTCTCTAAGCTCCGCGCT AGTGGCCATGGACGATTCATCCTTCTCCCTGATCTTCCCTCGCGGGACCCACCTTTCTTACCCACGCTTTGCTTCAAGAGGTCCGTTGGACTTCTTTCGC GTGTCGCCGACTCGGATGAGTCCGGGCGGTGGCTTTTTGACTCCGCCCGACTGTTTGAGTCGGCCGAAGGTGAGAGTGTTGAGGCCTGCTCGTGCTCTAC GAGAGGCCTTGATGGCTTGACGCTGGCTGAGGATTTTTTTGGAGAGTGTGGATCGGTTTGTGGAGGTGATGGATGGGATTTCGAATGGCGCGTTTTTGAG AGGGGAGGATTGTGAACTTGGAGAGGATTGTGTGGAGCTGCATTGGCTGAAATCGAAGGGATATTATGGGATTGAGGCGTTTATCGCGAATAGGATTGAG GTTTCGATGAGGTTGGCTTGGTTGAATAGTAGTGGTGGGAGAAAGAGAGGTGTTAAATTGAAAGAGAAGTTGAACGGAGCGGGTGTCGCGATGAATGTGT TTTGGAGGAGGAAGGGTTGTGTGGACTGGTGGGTGAATCTGGATGCTGCCACGAGGAAGAAGGTCTTGACTACCATCATGAGTAAAGCTGCAAAAAAACT TGACTCGTGAGGTTCTGGAAGCGGCAAGTAGTGCCTCTGGGGATGAGGTCTGGCTATACAGCGTGGGAGTTGATAAATTACAGCAATACAGCCGCCCTGC ATCAGCTCAAAGGACCATGCGAACGTTTCGTGATGATGTAGAATTTGGATCAGTTGTTACACCAATCACCTTTATTAAAAAACCTGCTGGTTTAGCCAGA GCCATTAATTCCTTAGTTGTGCTTCAGGACATTAATAAAATTATAACATCATGTCTTAATAGTGAATATGATGTAGGAAAGCTATTTTTCAGTTCGCTGG GTTCTGTTTGTACGATATCTGATTGTATATTACGAAAAATGCGAGGATTTCTGATGGTTATTTCACTTGATTGCACAAAACATGAACTTTTAGACGAGGA AGTTGACAAGCCTTCAGGTAAACCTAAAGAAAAGCCTGGTATTTGTAATCGCAAAAAGAAGGGACGGACTCGCAATACTAAAAGGCAAAATCCTGTCCCA AAGATATGTATGGATGGCATTTCATGTGAAAATCCACCTAAGGACATTGATTATTTAGTGAATAATAAAATGAAAGATGATTTAGCGGCATCCGGGGAAC TTCCTGATGTTCCTTTAGGGAAGGAGATTTCTATGAAGAGCTCATCATCGACTATAAAAATGGATCAATGTCGGGGATTGGGCACTGTTAAACTTCAGTC TACTTCAAGAAGAAGTAGAAAACAGAAAACTAAAAGTAAAAACATCCTTGTTGCGAGTGAGGTTGGAGATTCTCAAAAATCAATTATGGATGTTGCCTCT ACTGCTGCTCTTCCTGAAGTTGAAGTGGCAATAAGTGACAGGCATTTTGATAGTTCTACCATGCAGAACATAAAAAATGACAATTCAATTGGTAATGACA TCATTGCATCAAATTCAAACCTTTGTACTTCTCTTAGTGGGCTTACTATGGAGACCAGTTCTACCCGAAAAGTTGAAGGAGAGAATGTTGAAGATCTTCC TGAAAGTTTAGGTCCTCAATGTTGCTTATTGTCAAATGAAAGGAAAACTCTGTCTTCAGGAATAGATAGTTTAACTTGTGATGCTGATACTAATAAAGTA ACTCCTGTACCTGCATTGGTTCGTGGTGCTCTCTTCATCAATGAAGATTCCAGTCCTGTGAATTCAATATGTGCAGCTGAAGCTGGTGCAAGGTCAACTG TTCCTGACAAACCAATCAGAGAGGTTCACGTGAAAGAATCCGGGCTGTTGATGGGGCAAGATAGATGTCAATTTGAAAGTAGAAATTCAGCTTTAACAAA ATGCATTCCATATGAGTGGCCTGGTGTACCTTCTATCTATTTTCCATCTATTAACTCACACCTTCCTCCTGCTACTGATAGATTGCATCTGGATGCTGGG CGCCATTGGCATAATCACTTCTGTCACTCATTTGTTCCCACATTACAACAGGCAAGAAATGCACCAATTGAAGGTGGATGCAACCGAATTCTGTCTCATC CAATTCCTATGAGTTTAGACTGGCCCCCAGTTTTTCGTGGTGGCATGGCTCCATCACCAAACTGTAATTACGACTCTGGTTTTATCTCCAGGCGGCAGTG TACCTTTTCAAAAGGGCTGGCCGTTCACAATGTGCAAGTTGATGCAACAACTCCTGATGATGAAAGAAAGTATTCAGGGGATATGTTTGATTTACCCGAT CTAACAAATACACAGGAGCTAGCAGATGAATTTGAAAATCACTGGGTATCAGAGGAGGAGTATGAGGTTCATGCTGTTTCTGGTTTAGATTGTAATCAAT ATTTTGGTGGCGGCATAATGTACTGGAATCCTTCTGATTATCCAGGAACAGGTTTCTCCCGTCCTCCCTCTCTTAGCTCTGATGACAGTTTGTGGGCTTT GCGTGAAGCTGACATGACTAGGACAGTGGATGACATGGTTGCTTTCTCATCTTCGTATAGTACAAACGGGTTGACTTCACCCACTGCTGCTACATTTTGT TCTCCATTTGATCCCGCAGGGACAGGGCCCCAGACTGTCGGTTATGTGATGTCAGGTAATGAAGTATCTGGAAAGGTATTGCATTCTTCATCAGTTACAG ATGCAGCAGTGGATGAGGATACTTCTGGTTCTTTGGGCAGTAATTTACCTGGAGATGTTGAAGGGAAGGGAAGCGATTCACATCCTTACCCCATTTTACG GCCAATAATTATTCCTAGCTTGTCAAGGGACAGGTCAAGATCTGACTTTAAGCGTAGTGTTGACCATAAAAGCCCTTGTGTTCCTCCTACCAGGCGGGAG CAGCCTCGCATAAAACGGCCACCATCACCTGTAGTGCTGTGTGTTCCACGGGCTCCACGTCCACCCCCACCCTCCCCTGTCAGTGACTCCAGGAAACAAA GGGGTTTTCCAACAGTTAGATCTGGTAGTTCCAGCCCGAGGCACTGGGGAATGAGGGGCTGGTATCATGACGGAAGTAATATGGAAGAAGCTTGTTTAAG AATGGAGGGTGCCGAAGTTGTATGGCCTTCTTGGAGAGGTAATAACCTTAAAGTGCGGCCCATGATTCAGCCTTTACCTGCTGCCTTGCTGCAGGACCGC CTGATTGCAATGTCACAGATAGCACGTGACCAGGAACACCCTGATGTCACCATTCCTCTGCAACCTCCCGAGTTACAAAGCTGTTCTTCACTGAGTGCGT CTTTATCTTTGATGCATGGCCTTCTCCATGATGAGATTGACTCTTTCTGTAAACAGGTTGCTGCAGAAAATATGGCCAGGAGGCCTTACATCAATTGGGC TGTCAAGAGAGTTACCCGATCTCTTCAGGTTCTTTGGCCCAGATCTAGGACTAACATATTTGGTTCAAATGCGACTGGTATGTCTCTTCCAACAAGTGAT GTTGACCTTGTTGTTTGTCTCCCTCCAGTGAGGAACCTGGAACCTATTAAAGAAGCTGGAATACTGGAAGGTCGGAATGGTATTAAAGAAACATGTCTTC AGCACGCAGCTAGGTATCTTGCCAATCAGGATTGGGTAAAAAGTGATTCTCTGAAAACGGTGGAAAATACAGCTATACCTATTATTATGCTCGTGGTGGA AGTGCCACAGGATGTTATCATTTCTTTGGCTCCTATGGTACAATCACTAAAAGAAGAGCCACATGGTACTCCTGGCGGACATGGTAATGAAAGTCATTCT GATATTATCCAATCAGAAGACCCATCTTTCCCAAAAAGCTCTGAAATAAATTCTGATGCCCCAAAAGATTCCAAATCAGTTCGTCTTGACATCAGCTTTA AGTCACCATCACATACAGGACTCCAAACTACAGAAATGGTTAAGGAGTTGACGGGACAATTTCCTGCTGCTACTCCTCTTGCTTTGGTACTAAAACAGTT CTTGGCAGATCGTAGCCTTGATCAGTCCTATTCTGGTGGCTTAAGTTCCTACTGTTTGGTGTTATTGATCATACGTTTTCTTCAGCATGAGCACCATCTT GGCCGACCAATCAACCAAAACTATGGAAGTCTTCTGATGGATTTTCTTTACTTCTTTGGGAATGTATTTGATCCTCGCCAAATGCGAATATCAGTGCAGG GGAGTGGACTTTATATCAAAAGAGAAAGAGGTTGTAGCATCGATCCAATACACATAGATGATCCTCTTTTCCCAACAAATAATGTGGGAAGGAATTGCTT CCGAATACATCAATGTATTAAGATGTTATAATATCGGTGCAGGCTTTTTCAGAAGCTTATTCTGTTCTTGAAAGCGAACTTGTATTCCTAAATAGTGATG CTGAGTCAAGTTCAAGGCGACCTTACAGACTGCTTCCAAAAATCATCCCAAATCTCGATGTATCATAAGATTCTCATTAAATGAAAGATTTATTGTGTGA AGG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_52912; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_126789
| Blastp | Non-canonical poly(A) RNA polymerase PAPD7 from Mus with 34.81% of identity |
|---|---|
| Blastx | Non-canonical poly(A) RNA polymerase PAPD7 from Mus with 35% of identity |
| Eggnog | domain) containing(COG5260) |
| Kegg | Link to kegg annotations (210106) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019463331.1) |
| Pfam | Nucleotidyltransferase domain (PF01909.22) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |