Id Trinity | FTRINITY_DN55608_c1_g1_i4 |
---|---|
Name Transcript | Ll_transcript_126778 |
Sequence | ACCAAAGTGTGAACATGAGAGTATGTAAAAGTAGAGTAACAGAAATAGCCTAAAAAGCCTGCGTTCATTTCTCTCATCTCTTTCCCATTTTCGTCGCTAT CTCTCTCTCTTTCTCTACACCTTCCCAAACCAAACACTTTCATCTCATTTTCTCAAAAAACCATAACTCGTTTTCATGGCTCACCATCAACTCATCGACT CGCTCACTTCTCACATTTCTCTTTACCATTCTTCCATTTCAATTTCCCAATCCTCTAACCCTAACCCTAACCCTAACCCACGATCTTCAATTCTCAAATG GTTCTCTTCTCTCACGATCCACCAGCGCCAATCTCATCTCACCATAATTGATCCTACCTTCCTTCAAATCCTTCTCCAAATGCTCTCTAAGCTCCGCGCT AGTGGCCATGGACGATTCATCCTTCTCCCTGATCTTCCCTCGCGGGACCCACCTTTCTTACCCACGCTTTGCTTCAAGAGGTCCGTTGGACTTCTTTCGC GTGTCGCCGACTCGGATGAGTCCGGGCGGTGGCTTTTTGACTCCGCCCGACTGTTTGAGTCGGCCGAAGGTGAGAGTGTTGAGGCCTGCTCGTGCTCTAC GAGAGGCCTTGATGGCTTGACGCTGGCTGAGGATTTTTTGGAGAGTGTGGATCGGTTTGTGGAGGTGATGGATGGGATTTCGAATGGCGCGTTTTTGAGA GGGGAGGATTGTGAACTTGGAGAGGATTGTGTGGAGCTGCATTGGCTGAAATCGAAGGGATATTATGGGATTGAGGCGTTTATCGCGAATAGGATTGAGG TTTCGATGAGGTTGGCTTGGTTGAATAGTAGTGGTGGGAGAAAGAGAGGTGTTAAATTGAAAGAGAAGTTGAACGGAGCGGGTGTCGCGATGAATGTGTT TTGGAGGAGGAAGGGTTGTGTGGACTGGTGGGTGAATCTGGATGCTGCCACGAGGAAGAAGGTCTTGACTACCATCATGAGTAAAGCTGCAAAAAACTTG ACTCGTGAGGTTCTGGAAGCGGCAAGTAGTGCCTCTGGGGATGAGGTCTGGCTATACAGCGTGGGAGTTGATAAATTACAGCAATACAGCCGCCCTGCAT CAGCTCAAAGGACCATGCGAACGTTTCGTGATGATGTAGAATTTGGATCAGTTGTTACACCAATCACCTTTATTAAAAAACCTGCTGGTTTAGCCAGAGC CATTAATTCCTTAGTTGTGCTTCAGGACATTAATAAAATTATAACATCATGTCTTAATAGTGAATATGATGTAGGAAAGCTATTTTTCAGTTCGCTGGGT TCTGTTTGTACGATATCTGATTGTATATTACGAAAAATGCGAGGATTTCTGATGGTTATTTCACTTGATTGCACAAAACATGAACTTTTAGACGAGGAAG TTGACAAGCCTTCAGGTAAACCTAAAGAAAAGCCTGGTATTTGTAATCGCAAAAAGAAGGGACGGACTCGCAATACTAAAAGGCAAAATCCTGTCCCAAA GATATGTATGGATGGCATTTCATGTGAAAATCCACCTAAGGACATTGATTATTTAGTGAATAATAAAATGAAAGATGATTTAGCGGCATCCGGGGAACTT CCTGATGTTCCTTTAGGGAAGGAGATTTCTATGAAGAGCTCATCATCGACTATAAAAATGGATCAATGTCGGGGATTGGGCACTGTTAAACTTCAGTCTA CTTCAAGAAGAAGTAGAAAACAGAAAACTAAAAGTAAAAACATCCTTGTTGCGAGTGAGGTTGGAGATTCTCAAAAATCAATTATGGATGTTGCCTCTAC TGCTGCTCTTCCTGAAGTTGAAGTGGCAATAAGTGACAGGCATTTTGATAGTTCTACCATGCAGAACATAAAAAATGACAATTCAATTGGTAATGACATC ATTGCATCAAATTCAAACCTTTGTACTTCTCTTAGTGGGCTTACTATGGAGACCAGTTCTACCCGAAAAGTTGAAGGAGAGAATGTTGAAGATCTTCCTG AAAGTTTAGGTCCTCAATGTTGCTTATTGTCAAATGAAAGGAAAACTCTGTCTTCAGGAATAGATAGTTTAACTTGTGATGCTGATACTAATAAAGTAAC TCCTGTACCTGCATTGGTTCGTGGTGCTCTCTTCATCAATGAAGATTCCAGTCCTGTGAATTCAATATGTGCAGCTGAAGCTGGTGCAAGGTCAACTGTT CCTGACAAACCAATCAGAGAGGTTCACGTGAAAGAATCCGGGCTGTTGATGGGGCAAGATAGATGTCAATTTGAAAGTAGAAATTCAGCTTTAACAAAAT GCATTCCATATGAGTGGCCTGGTGTACCTTCTATCTATTTTCCATCTATTAACTCACACCTTCCTCCTGCTACTGATAGATTGCATCTGGATGCTGGGCG CCATTGGCATAATCACTTCTGTCACTCATTTGTTCCCACATTACAACAGGCAAGAAATGCACCAATTGAAGGTGGATGCAACCGAATTCTGTCTCATCCA ATTCCTATGAGTTTAGACTGGCCCCCAGTTTTTCGTGGTGGCATGGCTCCATCACCAAACTGTAATTACGACTCTGGTTTTATCTCCAGGCGGCAGTGTA CCTTTTCAAAAGGGCTGGCCGTTCACAATGTGCAAGTTGATGCAACAACTCCTGATGATGAAAGAAAGTATTCAGGGGATATGTTTGATTTACCCGATCT AACAAATACACAGGAGCTAGCAGATGAATTTGAAAATCACTGGGTATCAGAGGAGGAGTATGAGGTTCATGCTGTTTCTGGTTTAGATTGTAATCAATAT TTTGGTGGCGGCATAATGTACTGGAATCCTTCTGATTATCCAGGAACAGGTTTCTCCCGTCCTCCCTCTCTTAGCTCTGATGACAGTTTGTGGGCTTTGC GTGAAGCTGACATGACTAGGACAGTGGATGACATGGTTGCTTTCTCATCTTCGTATAGTACAAACGGGTTGACTTCACCCACTGCTGCTACATTTTGTTC TCCATTTGATCCCGCAGGGACAGGGCCCCAGACTGTCGGTTATGTGATGTCAGGTAATGAAGTATCTGGAAAGGTATTGCATTCTTCATCAGTTACAGAT GCAGCAGTGGATGAGGATACTTCTGGTTCTTTGGGCAGTAATTTACCTGGAGATGTTGAAGGGAAGGGAAGCGATTCACATCCTTACCCCATTTTACGGC CAATAATTATTCCTAGCTTGTCAAGGGACAGGTCAAGATCTGACTTTAAGCGTAGTGTTGACCATAAAAGCCCTTGTGTTCCTCCTACCAGGCGGGAGCA GCCTCGCATAAAACGGCCACCATCACCTGTAGTGCTGTGTGTTCCACGGGCTCCACGTCCACCCCCACCCTCCCCTGTCAGTGACTCCAGGAAACAAAGG GGTTTTCCAACAGTTAGATCTGGTAGTTCCAGCCCGAGGCACTGGGGAATGAGGGGCTGGTATCATGACGGAAGTAATATGGAAGAAGCTTGTTTAAGAA TGGAGGGTGCCGAAGTTGTATGGCCTTCTTGGAGAGGTAATAACCTTAAAGTGCGGCCCATGATTCAGCCTTTACCTGCTGCCTTGCTGCAGGACCGCCT GATTGCAATGTCACAGATAGCACGTGACCAGGAACACCCTGATGTCACCATTCCTCTGCAACCTCCCGAGTTACAAAGCTGTTCTTCACTGAGTGCGTCT TTATCTTTGATGCATGGCCTTCTCCATGATGAGATTGACTCTTTCTGTAAACAGGTTGCTGCAGAAAATATGGCCAGGAGGCCTTACATCAATTGGGCTG TCAAGAGAGTTACCCGATCTCTTCAGGTTCTTTGGCCCAGATCTAGGACTAACATATTTGGTTCAAATGCGACTGGTATGTCTCTTCCAACAAGTGATGT TGACCTTGTTGTTTGTCTCCCTCCAGTGAGGAACCTGGAACCTATTAAAGAAGCTGGAATACTGGAAGGTCGGAATGGTATTAAAGAAACATGTCTTCAG CACGCAGCTAGGTATCTTGCCAATCAGGATTGGGTAAAAAGTGATTCTCTGAAAACGGTGGAAAATACAGCTATACCTATTATTATGCTCGTGGTGGAAG TGCCACAGGATGTTATCATTTCTTTGGCTCCTATGGTACAATCACTAAAAGAAGAGCCACATGGTACTCCTGGCGGACATGGTAATGAAAGTCATTCTGA TATTATCCAATCAGAAGACCCATCTTTCCCAAAAAGCTCTGAAATAAATTCTGATGCCCCAAAAGATTCCAAATCAGTTCGTCTTGACATCAGCTTTAAG TCACCATCACATACAGGACTCCAAACTACAGAAATGGTTAAGGAGTTGACGGGACAATTTCCTGCTGCTACTCCTCTTGCTTTGGTACTAAAACAGTTCT TGGCAGATCGTAGCCTTGATCAGTCCTATTCTGGTGGCTTAAGTTCCTACTGTTTGGTGTTATTGATCATACGTTTTCTTCAGCATGAGCACCATCTTGG CCGACCAATCAACCAAAACTATGGAAGTCTTCTGATGGATTTTCTTTACTTCTTTGGGAATGTATTTGATCCTCGCCAAATGCGAATATCAGTGCAGGGG AGTGGACTTTATATCAAAAGAGAAAGAGGTTGTAGCATCGATCCAATACACATAGATGATCCTCTTTTCCCAACAAATAATGTGGGAAGGAATTGCTTCC GAATACATCAATGTATTAAGGCTTTTTCAGAAGCTTATTCTGTTCTTGAAAGCGAACTTGTATTCCTAAATAGTGATGCTGAGTCAAGTTCAAGGCGACC TTACAGACTGCTTCCAAAAATCATCCCAAATCTCGATGTATCATAAGATTCTCATTAAATGAAAGATTTATTGTGTGAAGGAGGGCTCATGGTTTGTGCA AGCTATATGCATTTGTCTGTTACTCTGGTCATGTTACATCAAGATGGAAGCTGATCACCCACCCAAGGCAATTATTCCAAATGGTGGGAACTGAAGTTAG GCAATGTAATATCTTTCTCATGCCTAGACCTCCAAGCATTGGGTATGCTGATGTTTTCTAGCAATTTTGTTCATAATTTACTTTTGTTGTACATGGTGCA AACTGCAAAGAACTAGGTTAGTTCTGCATGCTACACATTGTAATATCTTCAGTTCTGCTGGATCATCTTGGCTGGTTGAAACTACTTTTTGGAAATCAGA AGCAGTTTTGGTTCTTCTTGTGTAAGTAGTCTTTATTAATCCTAGCAAGCAAATGCAGGTCCATGAAGTATGGAAGTTGATGTGAAGATTTGAAGATGGT AATTTGATACACAAGAGTGACCTTTGAGCGTCTTCATGACCAAGAATGGCAGCACCAGGCCAGTTTATCACTGCCCTTAAACTTCATGAACACATTTATT TATTTGTTTATCTTCATTGATCATACTTTATTGGTTTATGTATCCTTATTTAACCATCCAAACTCAAATCTCTTTCCAACATTTTGGAGCTTTTTTTTTG GGTTTTGTTTCTTGGATGTCGTGAGGGCCTAATTTGGTTAAGTATATGGACAAAGTACCACTTATAAGCTATAATGGCTTTTGGGAATCCTCCCCTCTTG AGCTAGCTTTAGGATTGGAGTCTATTGTAGTTGTGTCAATGTTATATCTCTCTTATTCTTATTGGCATCAGTGCCTATATTGGAAACTTCACTCTAAATG TGGTTGTGAGAAGGGTGTTTTAACGGCCCATATTGGTTAATTACCCCTTTTAATGACTTGGCAAATCCTCTACCTTATGAGCTAGTTTTTGAGGTAGACC TGAACCCACTTATTTTAATGTGCAATTATTTGAAGAGCAGGGGGTTTTGAAGTTAATCTTCCAGCAAGTTATTTACCTAGATATTTGGTCTCTCTCTTTT TTACACCTCAACTATCACGGCCAACTTCGATTTGCAATTCAACTGTGATTGCTTATTTGTCGGGAGGAATTCATTTTTGAAATTAATATGGTCAATTTCT GCTAACTGATTGGCTGAAAGTTTTTTGTTGCTATAGAAAACTTGGCAAAAACAGCATGATCAGTAAAAACAATTTCCTGGATTGTATTTGAAATTCATAG ATGAATAAGCCATGATGTGATGGTAAGGTTGGCATAAGACTTAGTAATCACAGGTTCTAGTTGTGTCGACAAGCTATACTGATAGGGTTTCTTGATCATT TATATGCATCAAAGTACAGTGTAGACCTGAAGAACCAGGGTTTTATTGCAATTTAAGAACCTCAAATTGCAATTTAATGTGATTTTTTATTGCCATCAGG GCTTACTGCTGGAAAAATAATTGCAATCTAGTTCGACAGATTATTGAAAAGGGCAATATACTTCGGTAATCTCTCGAGGTTTGATGAACTCAAAATGCAG TGATAATGCAAAGTTTCTGGTGTATCACCTCTGGCATGAGGTTTCTCAAGTTTTTAAATTGAGGGTCCTCCTTCCCTCAAATCATGGGATAGTAATCAGA TGAAGTGTAAATCGGCTGAAGAACTTGGATGGAGATGATTGCGGGAGGAATTGTGACATGATAAAATCATCTGACAACAACAAAGTCTCGGATGGAGTCG GCTACATGGATCGGAAGATGTCATATGCTCTATTATAAATCATCTTAGTTTATTAAAAAATAGGTTGTTGAGCATTAAGGTACTGTGTGTACAAAGATGC TTCATCTTTCTCCATTGTTATCCCATCTATAAACACAGGAGATAGATTTTGCAAGTGTTTCTGCTCAGGCTGAACAAAACATGGACTAATGTAGTTGGAT GATTCACTTACATTCTTTTGTCTAAATTTTATGTTGCACTTTTAAAATCTAATAATTGGTTCTAATTGGGTTGGATAGTTGATTTATTTTACTTCATATC CGAACCAAACTAGTTACAACTGTTCAACTCTCATATACCTTTAATTTCAAACCAATTTGATAAAAAAAATATCTTTTAA BLAST |
Tissue | flowers |
Gene name | LI_gene_52912; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_126778
Blastp | Non-canonical poly(A) RNA polymerase PAPD7 from Mus with 33.67% of identity |
---|---|
Blastx | Non-canonical poly(A) RNA polymerase PAPD7 from Mus with 33.67% of identity |
Eggnog | domain) containing(COG5260) |
Kegg | Link to kegg annotations (210106) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019463331.1) |
Pfam | Nucleotidyltransferase domain (PF01909.22) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |