| Id Trinity | FTRINITY_DN55609_c0_g1_i21 |
|---|---|
| Name Transcript | Ll_transcript_125228 |
| Sequence | GAAAAATGATTTTTTTTTTTTTTTTGAAGAAACATAAGGTAAGGCTTTGCTCATGGAAGTAAAACTGCAACCGCCTTTAGCTGCATAATTGATAACATCG ATCAACTTCATCTCTCTCTCTCTGATTCTTCTGCAATGGATTTCATTCCCTTTCACGATGGCAACATACATAGTTTTCTTCACTCCCGTTACCTTCACAC TCGCTATGATGTTAATCACAGTTTGCAGACACACTCTTCGTTGATTCGGAGGCTTTCTCAAGAGCGAGAGTTAGAGGTTGGGGCATCTTGGTTGTGTTAA TGCGGTGGCTTGGAATTCCAAAGGTTCATTGTTGATATCTGGATCAGATGACACACGTATCAATATTTGGAACTATTCTGACCGAAAACTCTTGCATTCA ATTGACACCGGACATTCTGCTAACATATTCTGTACTAAGTTTGTACCAGAAACTTCTGATGAGCTTGTGGTCTCTGGAGCTGGAGATGCTGAAGTAATAT GCTATGATCCATTGAATAATTTTTGCAGCTTATGTGATTTTAACTACAAGAATGTTTACATGTTTCTTTTTGGAAGGTCCGCTTATTTAATTTGTCTTGC TTAAATGGGAGAGGACCAGGCAATAATGCCATTGTTCCATCAGCTCTTTACCAATGCCATACTAGAAGAGTAAAGAAATTGGCTGTTGAAAATGGAAACC CCAATGTGGTATGGAGTGCTAGTGAAGATGGGACCCTGAGACAGCATGATTTTCGAGAAGGTACATCTTGTCCTCCAGCGGGATCTTCACACCAAGAGTG TCGAAATGTTCTACTTGACCTACGGAGTGGAGCTAAGAGGTCACTTGCTGATCCTCCTAAACAAGTCCTTGCTCTAAAATCCTGTGATATTAGTACAACT AGACCACATTTGCTCCTTGTTGGTGGGAGTGATGCCTTTGCACGTTTATATGATAGGAGGATGCTACCGCCTCTAAGCTCCTGTCGGAAAAGAATGTCAC CACCCCCTTGTGTTAATTATTTCTGTCCGATGCATCTTTCTGATCGTGTCAGTCCTCTGCTTTACTGATCTTCCATTATCTGTTTTTCCAGTGTTTATAT TCCATCATTTGCGTCATCTGTTTAATGTTGGGAATATTACAAGTCTTCTCTCTTTTTTCGGTAAAAATAATTCTTTGATAGGGGAAAGGGACACAAATCA CAATTCAATAGGATAAGGAAACCTTGCAAAACAGAAAGAAAAATTGGATATGTTGGCAGCTATAATAAACTTTACTCTGGTATTATATGTATTTTATTTG GAGGGGTGTTAGGGTATATAGTCCTTTTCTCTTAACTCCTTTCTTTCCCGTCTCTGATAAAAGCTTTTTATTTTTTATGTATGCAAAAATTCATATCTTT CTGTTATTTTTTGTTTAGAGATGTTGCCATTGTGACTGTGGAAGTGGCAGCCATGGACAGAGTAGTGATTTTGTTGTTGAATTCCTATCAGTAGTTTTAG TTAAATGATTTAAACCTGAATGGCCTATTATAAGATTTGGTTTCTGCAGCCAACTCCACCTACTGGGAAAAGGCTTCGATTGTTGTTGGTTTTTGAAAAA GAACTCTAGCAGCATAGAATCTCAATATTACATGATGCCGTGTAAAGAGACTGCACAATGCTGGACATAAGAGAAGAGAGAGAATCAAGTGAGAAAAGGA GAAAAATCTGCAACTGAATTGTGCATTGAATAATCTGAGTTTGTTCTCAGTCTGTTTTATATTTATACAACACTGTTAAGAAGTTATAACAGCTGGCAGT GCTTACTGTCAGTAACCACCTGCTAACAACTTTCTGGGGTTAAACTTGATGGTGGGGTGCAGGGAATGCACAATAGGCGCAGAGAGTTAATTATTCAAAC CTAATGCTTACTCTAATATGCTGCAATCAGACATCTCATTGGTAATAAATGCATACCTCTGATGAATGCCTAAACCAAACCCAAGTGGTTGGTGATAAAA ATCTTTCATTCTTCATATTGATGTCGTGTAGGTTACCATGTTCTCTCTTCCACTATCCTCATAGGCATATTATGTGCGTTTAAGGCTTTCTGGTACTTTA AGCCAAATACTGTTGCACTCAAATTGTGTATTGTTTCTTCCAGGGACATCCAAACGTGCACTTAACTCATGTTGCATTCAGTCCTGATGGATATGAGGTT CTCCTTAGCTATAGTGGGGAGCATGTTTACTTGATGGATGTAAATCATGCTGGAGTGAATGAGATGCAATATACTTCAGGAGATGTTTCAAAGCTAATGA CTTACTCTCCAACAACTGATAGGATCAAATTGCAGCCTTTTGTCTCTAATGCCTTCCCAAATGGTTTTCCTATTAAAAAGAACATTGCTGAAAAGCTTGA CATGTGCAAGAAGCTATTAAAATTTGCTAAGAAGTCATTGAACAAGGGGACGACATCCCATTATGGAATAGAGGCTTGTAATGAAGTTTTGAATGGCCAG AGTCATGTTGTCGGGCCTGCGCTAAAATATGAATGCCTGTGTATTCGTGCTGCATTATTACTTCAGAGGAAGTGGAAAAATGATGCTTATATGGCCATAA GAGACTGTTATGCTGCTAGGAAAATTGATAATTCCTCATATAAACCACTTTACTACATGTCAGAAGCATTGTCACAGTTGCATAGACACAAAGAAGCTTT AGATTTTGCTGTTGCTTCCCATATATTGGCACCATCCATATCTGAAGTTTCAGAAAGAGTAGAGAATGTGAAGAAGGATATAGCTTCAGCTGAATTTGAG AAGAGTATTAAGGCAAACCATGGATCATCAATGTTTCATACTCGAGGTGGAAGAATATTATCATTGAATGACATGCTGTATCGTTCAGAAGCTAATAGTG ATGCTTCACAAGATGGTCCAATATCAGAGAGGGATGATTCTGATTACGATGAAGAATTGGAGTTGGACTTCGAAACATCCATATCTGGTGATGAGGGACA TGATGATGAATCCAATATTCTTCATGGGAGTTTAAATCTTAGAATTCATCAGAGAGATGACTCCGGAGAAAATGCTAGTGCAAATGGCTTGTGTGAATCA CCCTCATCTTCCTCACAGAACAATGGAGCTTGTTATCAGGCTGAAGCAGTTGTTGATATGAGGCAGAGATTTGTTGGCCACTGCAATGTTGGAACTGATA TAAAGCAAGCCAGTTTTCTTGGTCAAAGAGGTGAATATGTTGCCAGTGGAAGTGATGACGGTAGATGGTTTATTTGGGAAAAGAAGACTGGTAGGCTCAT AAAAATGCTGAATGGTGATGAATCCGTTGTAAATTGTATACAATGCCA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_52915; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_125228
| Blastp | WD and tetratricopeptide repeats protein 1 from Mus with 55.22% of identity |
|---|---|
| Blastx | WD repeat protein iqw1 from Schizosaccharomyces with 44.16% of identity |
| Eggnog | WD and tetratricopeptide repeats(ENOG410XWAR) |
| Kegg | Link to kegg annotations (230796) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019438517.1) |
| Pfam | WD domain, G-beta repeat (PF00400.31) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |