| Id Trinity | FTRINITY_DN55609_c1_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_125236 |
| Sequence | AATGAAGGGAGTTGTTATATTTAGGAGGGAATCGAAAATCCGTTGAAGGCTGAGCTTGTATCAGCGATGAGTAGTAGTTGGAGTTATGGCAGTGCGATTC AAGCACCTTCTTCCGAAGAGGAACTCAGTGAATCGTTTTCAACATCATCTCTCAATTTCTCTTCTGGAAACCCTAGAATCGAGGAGACTCGTGGCCTCAT GCATCTTTTTCGTCACGATTCTAACTCTTCCCTTTCACCTTCAAATCCTTCTCCTCTTCCAGTTGGACGGAAACCACTTGTTTGTGTTGTTGGAGTTCCA AATCACATGACTTATGCTGATTTCTGCCAGTTCTCTGGTTCCTTTATTCACCATATCCTTGAGATGCGCATTGTTAGAATGGATGGGGTGGAGGACCAGT ACAGTGTTTTAATAAGGTTCGATGACCAAGACTCCACAGACAGCTTTTATAAGCATTACAATGGCCGCAGCTTCTCATCTTTGGAGGTGGAGGTTTGCCG AGTTCTCTTCACAATAGATGTACAGTACACTGGCTCAATTGAACATGCACAGCCATCTAACAGTAGTTCAAATGAACAGCCTACATGTCCTGTCTGCCTT GAGCGATTGGATCAAGACACAAGTGGAATTCTTACAACTATATGCAATCATTCTTTCCACTGTTCTTGTATTTCAAAATGGGCAGATTCTTCTTGTCCTG TATGCCGCTATTGTCAGCAGCAAGCTGAAAAATCTATATGTTTTGTTTGTCAAACCACTGAAAACCTTTGGATATGTGTTATATGTGGTTTGGTTGGGTG TGGAAGATATAAAGAAGGGCATGCCATAATACATTGGAAAGAGACACAACATTGCTACTCCCTTGAAGTGGAAACCAAACGCGTGTGGGATTATGTGGGA GACAACTATGTTCATAGACTTATTCAGTCCAAAACTGATGGGAAATTGGTTGAGTTGAATTCTCACTGTGTGCATGCAGACAATGGGTGTGGAAGCTGCA GCTGTGAAGATAATTCCATGAGCGAGGCTATACTCAACAGTAAAGTTGAAGCTATTGTCAACGAGTACAATGAATTGCTTGCTAGTCAACTTGAAAGCCA AAAATTATATTTTGAATCCTTATTACAAGAAGTAAAAGAAGAAACCGAACAGGAAATTTCCATAGCTGTTCGGAAGGCTCTCAGTCTCAAAAAGCCAAAG ATTCAGGCCAAGATCGACAGAGTTAATAAAGAGAAGAAATTTCTGGATGATCTTAATGAGAACCTTGTGAAAAATGAGGAGATTTGGAAAGCAAAGTTAC TTGAGATTGAAGAGAGGCATGCTTTCATCCTTTATTTATTTCTCTTGTGTTTCTCATAGTCATAAGCCAATAAGCCATAATAGTTAGTATGTATTTTAAA GAAACCTTATTGTCAAATAAAGCATGTTAGATATATAAAAACCATTCTTGTTCCTTCACCCAACAGCTTATGCTTTTAGCCATTTAGGAAAATTGGTTTT TGACATGGTATCAGAGCTTCTATGAAAGTGGTCTGGATTCCCCATTCTTCTAAATAAATAAAAGAAGTTAAAATTTAGCACAAGGTATGGTTGACATGTG CATAGTCTATGTATCAAGCCCAAAAGGCTATTGTCTGAGGCGCATGTTATATATATAAAACCATTCATGTACCTTCAACGAACAACATGAGCTTTTGGCA TGGTTGCTGCTTTATTGTGTTTGGCATTTTCTTGACTTTGTAGTTGTTATGTTGTGAATTGAATTCCATTTCTTGAACTCAAGTGGTTTTGAAATTTTGA TCCAAAGGTTTGTAAACTGATGGATAGAGGGTGAGCATCAACGCAATGGTAAGGTTGCTGCTTAGTGATCATGAGATCACGAGTTCAAATCCTAGAAACA A BLAST |
| Tissue | flowers |
| Gene name | LI_gene_52920; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_125236
| Blastp | BRCA1-associated protein from Mus with 42.03% of identity |
|---|---|
| Blastx | BRCA1-associated protein from Mus with 43.11% of identity |
| Eggnog | BRCA1 associated protein(ENOG410XSS2) |
| Kegg | Link to kegg annotations (72399) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019458397.1) |
| Pfam | BRCA1-associated protein 2 (PF07576.11) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |