Id Trinity | FTRINITY_DN55610_c5_g1_i2 |
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Name Transcript | Ll_transcript_124820 |
Sequence | CGCGTAAAAGCCGCAAACAATTGCAAGATCGGTCCCAGAAGTCCCAAAGCTGTCACCACTTTGGATTCTAGGCAGAAAGAGAGAGAGAAGGAAGGAAAAA AAACATAGAGAGAGAAGAAATAGAATATTATTAATAAAATTTCCAAAACTTGAAGGATTTGGTGTTACAATATCTTCTTCATTCTCCTATATTGCTGTGC GATACCAACAATTAAAAACATAATCTTTTTCTTCTCTCTCTTCTGCGTTGTCCCTTTCAAGTTCAAAAGGGGCGTAATTGAACAACCCCAGAAGGAAATT TTAGATTTTGAAGAGGATTCTGGGTTCAACTTCTTCTGGGGTTGATATTATTATAAGGGATGGGTTTTGTGAATGTGAGTGCCAAATTTTGCTGACACGT GTGTTGGTGGTGCCATGGTTGGGGACACAAATTTGCATATGGAGTCTCCTTCTTCTGGTAACATAGCCCATAACTTGAAACAAAGAAGACTCTATCAAGT GTGGAAGGGTGGCAATAAATTTCTCTGTGGTGGTAGGCTGATTTTTGGTCCCGATGTAGCGTCCCTTTTTCTTACGATATTCCTAATTGCCGGACCTGCA TTTGCATTTTGTCTAAAAATATATCTTAAAATCAGGGATGGAAGTGATGATGCACATTGGTATCCTGTATTGGCTGTTGGTTTAACTCTCACTGTATTGG TAAATATTCTTCACAGTCTTGTCCTTAGAGTAAAATCTTTCAAGTTTCCGAGAAACTAGTCTTCAACCCTTTCACTCTTTCCATCATTTACCTGCTACTT ATACTCTGCTCTCTTTCATTTACCTTTTTTTCAGTTATAAAAACTAAAAGCTAAATTTTCCATATGTATAACTTCACACACAGGGTTATCTAATGTGTAC ATAAGATATCATCATGATAATACGACAGTAAGAAATGTTTTCTGGACTACAACATCAGTTTAGTACCATGCATCAACATTGTTTTTTGTAATTAAAAAGG AAACATTTCTCCACAAAAAAGTCATTTTTTAGTATGGCTTATGATGCGAGCACCTTTCTTATTTTGAAAGTAAAAGCTCATACGTCAGACAACTCATGTG TAGGATTTAATATTCCTCCTCTTGACTTCTGGGAGAGATCCTGGAATTGTTCCGAGAAATTCAAAACCTCCTGAATTTGATGACGCATTTGACATGACTA CCCCTTCCATGGAGTGGATTAATGGCACAACCCCTCATCTCAAACTACCCCGAACAAAAGATGTAGATGTTAATGGCCACATTGTGAAAGTGAAGTTCTG TGATACATGCTTGCTTTATCGCCCGCCCCGTACTTCTCATTGTTCCATATGCAATAACTGTGTCCAGAAATTTGATCATCACTGCCCCTGGGTTGGCCAG TGTATTGGAATGCGAAACTATCGATTCTTCTTCATGTTTATTTCAACATCAACCATTTTGTGCACATATGTCTTCGTGTTTTCTTGGGTCATTCTTGCCA AGAATGGCATTTTGAAGTCAATGGCACATGATTATCTATCAGATTTTCTCGTAATATATTGCTTCTTAGCTGTCTGGTTTGTTGGTGGCCTCACAGCTTT CCATTTCTATCTCATTTGTTCAAACCAGGTAACATTTCAATTCTCATTGTATGAAGTTTCGGTTAGTTTTTTATTCTTGATTTATCTCAAATACATGTTT CAGGTGTTTTTCTATCTTGGCCTCCTCCTGTGGTATTACTTAAAAAAATTTGTGGTTGACTTTACTGATTGATAAAATTATTATGTTCAGTATTGTTCTA ATGCTAGATGCATAGTTTTAATGAACGATGAATTGTTCTTCTTGCCCTCTCCATTTAGTAGAAAGTTCAAAAAACTATGCTTCTATGCTTAGAGATATTT TGAGCAAATATATACTTTAACAGGGTGTAAAGGGAAGTGGAAAATGTTTTTGATTCCAAAACCTAGAATTTTCCGAAATTAATCAATAAATCAAGTCGCA GACTGGTTTTAGTACAATAAACTAGTAGTTGGTATTGAATATTGACTAGCACATGTTTAATGATGCACATAAATTTTATAAATGGATCAATTACCGACAT CAACTTACCCTTTTTGTGTAAATTAAAATGTGCCTTAGGGAACATATTTAAAAAAAACTTTCTTGATTACAACACGAAGCTAATATCGCACTGTGACAGT CACTAATTTCATTGATTGTTCTGTTTAGATACTATACTATTGTTTATTAGTTCAAGCTTACTTATTAACTTATAACTTTTTTTGTCATGCAGACGACTTA TGAGAACTTCCGATACCAATATGATAAGAAGAGGAACCCATACAATAAGGGAACACTGCAAAATATCTGTGAAACATTTTGTTCCAGTATTCCGGTGTCG ATGCATAATTTCCGATCATTTGTGGTGGAAGATGAACATATGACCGTCGAGTCCATGACTCCAAATATTATGGAAGGAATGATGTCCTCGAAGGAAAAAA TTGACATTGAAATGGGATCTATGCGTGCAGAAGATGGTGGCATGCCAATTCCTAAACTTTTGCAAAATTTTGATTTTGATAATTTTGAGCATGCTATGAA GTTTGAAGATGAGGAGGGACAGTCTGTAGACGAGGAGGGACAACCTTCTTTTGATCCATTATACAGTATTGAGGATGACGTAAAAGATTCGGCACGAACT TCTGTTGCTACAGTTTTAAATTTCCATAGCATAACTGAAGATGAAAAGAAAGAGACTCTGCAAAGCTCCAATAATGGAGCCAATGTTGGGGAACCTTCCG AAAGGCCTATTAATGCTGATGGAACAAATGCAATTGAAGAAACTGATCATAGGAACAGATCATCTTAAGCCAGAATTTGAGCTTTTTTAATGCAGAGAGG TTTGCTGCAGTTCCACTCTTCAATTGCCTTGTTTGTTTGCCTCGAAGTAGATAAAGAGGATAGTTTGCTTCCGTAGTTGCAGCAGAGCAATTAGTGGCGG CTTGTAAGAGTTTTCATATGCAATACTCATGCAAGTTCATTGATGCTACTATTCATGCTGGAAATGATGGAGAGACTGATCTTGCACTACTTCTCTATCA TTTTAGTGTAAAAAAGTATGGCAAGTGTTTTGTTGTAAGCTGTAAATGCCACTAGCATTCAAAATAATACAGAAAGATTGTTTGGATAAGTTTATTATAG GCACCATGTTAGGTGTGCCTATTTCTTCCTTTTGGTCCTTTGTTAAGATCTTAGATTGGATGATTTTTTTTAATTTACCATTAGAAATTAGTTTTTATGT AAGTAATACATTGATTTGTCTATTTGAGATGCAATATATCATTTCCTCTGCTTAAAGCATCCATGGTTGATTGTTAAGGTTCTTCTTAACGGAATGAAAA TATTTTAACATTCTâBLAST |
Tissue | flowers |
Gene name | LI_gene_52933; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_124820
Blastp | Probable protein S-acyltransferase 4 from Arabidopsis with 56.44% of identity |
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Blastx | Probable protein S-acyltransferase 4 from Arabidopsis with 70.27% of identity |
Eggnog | Zinc finger, DHHC-type containing(COG5273) |
Kegg | Link to kegg annotations (AT3G56930) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019458028.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |