Ll_transcript_126412

• Id Trinity: FTRINITY_DN55613_c6_g1_i3
• Name Transcript: Ll_transcript_126412
• Sequence: GTAAATGAAATTTCTCCAAGTTTTATTCATGCTTCTTGTTGCTTCTCCTCTCTCCATCATTCTCCTTCGCAAAAATCAACATGGTATAAGAGCTTTAAAG CTCTGATCACCACCTCTGCTCTCCTCTCCTTCTCCGCTCTCTTCTCCTTCCTTCTTCCCTTATCCTCTCTGCCTTCTTCAAAAATGAATAACAACGATCA AGACTGCAACCATACTATCTTCACTCTAGTGATAACTCATCTCTCATCCTCGTGACACCTCCTCTCGACGACACAAATTACCACTCTTGGGCAAGAGCAT TCAAGATGGCACTTGAAGCAGAAAATAAGATCATGTTCATAGATGGAACACTACCTCAACCGAAGCCTGATGATTCCATGTACAGAGCTTGGAGAAGGTG TAATAACATGGTGTTATCCTGGATACAACACTCATTTCAACTAGTCTTGAACCACAAGCGAGTGCCTTAGCCTTTAATTCCAAGCAAGAACCTCAACCTA GAAACACTGCTTTCACTGAGAATGGAAATTATAGGCCTAGAGGCACTTTTACTCATAGAGGAAGAGGTAGATCATTCACTAAGAACTTAAATAACAAATT CTGCACTTTCTGTGAAAGAACAAATCACACTGTGGACACATGCTTCTTAAAGCATGGATATCCACCTGGTTACACAAGCAACAAGTCATCCAGAATGGCA AATCATATCGCTCACTTCCCTCTTAATAAAGATACTGATTCTGCTTCAAATGCACAACAAGGTGTTTCCACTAGCAGCCAGTCAAGAATGTTCGCAGATG AATAAGTACAAGGCATCTTGGATCTCCTAAATCAGTCCAAGATCACACAAGAGCATGTTCTAAATTCAATCAACACAATTGCTTCAAATGCAGAACCATA TCAAGAAGATGATTGGTTCAGCTAGAATTCAACAAGGATTATATCTTTTCAATTGTCAACACAATGCACCAAGTTCTTATGCTTTTTCTTACTTCTCTAA TGACATTAATAATAGATCCTTATGGCATTTGCGCCTTGGACATGTTTCTGGTTCTATTATGTTAGCCTGAAGCAAGCAATTTTTTTTTATTCCCCATAAT AAGCATGATCATTTACTGCCTTGTGATGTTTGTCATTTAGCTAGGCATAAGAAACTTTCCTTCTCTGTCAGCCCTTCTAGGAGCACAAGGACTTTCCAAT TACTTCATGCTGATACTTGAGGACCATATTCCATCCTTCTCTCTTTGGACACAAGTATTTTCTGACCCTTGTAGATGACTTTTCTAGATTCACATGGACC CTGGTGATGAGTTCTAAAGCTGAGACCAGAACTCACCTAATACAATTCACCTCTTACATTGAAACTCAATTCCACACTAAGCTCCAAACCTTGAGAAGTA ACAATGGAGTTGAATTCCTAATGAGTGATTTTCTTGCTTCTAAACGCATCCTGCACCAAAGAACCTGTGTTGAAACCCCTCAACAAAATGGTATTGTTGA GAGGAAACATCAACATATTCTCAATATAGCTAGAGCCTTATTCTTCCAATCAAATATACCTCCTAGCTTCTGGAATTTCAGCATCCAACATGTTGTTCAC ATAATGAATAGGTTACCTACTCATCTACTTCACCAAATGTCATCATACCAGAAAATTTTTAATCAATTAACCTCCATTGACCACTTAAAAGTCTTTGGTT GCTTAGCTTACTCTACTACCCTACAAGCCAATAGAACTAAGTTTGACCCTAGAAGCAGAAAATTTGTCTTTCTTGGTTATAAGGAAGGTACCAAAGGTTA CATCCTTTATGATTTTGCCTCTCATAAATTCTTTCTCTCTAGACATGTTCACTTCTATGAGCAAATTTTATCCTTCACTATTGATTCCTCTGAGTCTCAA CCTGTATGCAAGGTTAATCCTGCCTCTTTCACAACTCCTTCATAACCAGCCTTAGATCATGTGCTTCCCACTTCTGTTGTTCCTACCAATCCACGTAACT CCAACTCAAAGTCTCCAATTCAAACTTCAACTACTATACATTCCACTAGAATTAGGAGACATCCAACTCGCCTAAGAGACTATCATTGTAATTTAAGTAT CTCTACTGCTCATCCCACCCAAGACTCTATCAAATATCCCTCGTCTTCTGTCCTCTCCTACAACAACCTCTCAAGTAACTACAAGCATTTTTGCCTCAAT ATCACCATTCAAAATGAACCAAAATCCTATCACCAAGCCTATTCCATTCCTTGCTGGCAGGAAGCTATGAAACAAGAACTCCAAGCCCTTGATCTTAACC ACATATGGTCCCTTATGCCTCTGCCCCCAAATAAATCCATTATAGGCTGCAAATGGGTATATAAAATCAAGTATCATGCTAATGGCACTATTGAGAGATA TAAGGCAAGACTTGTAGCTAAGGGCTACACTCAACAATAAGGGATAGATTTCTTTGAAACCGTTTCCCATGTGGTTAAGATTACCACTGTTAGAGAGGTT CTTGCCGTAGCTGCCATTAATTCCTGGTTTCTTGAGCAACTTGACATAAATAATGATTTCCTTCATGGTGACTTACACCAAGAAGTCTATATGCAGCCCT CACCTGGTCTCTTATCTCCCACATCTCCTCTTGTTTGCAAGTTGCACAAATCTCTTTATGGCTGGAAACAAGCTAGTAGAGAATGGCATACCACTCTTTC CTCAAAACTGCTATCCCATGGCTTCACTCATTCTCAAGTTGATCAAGCCTTGTTTACCAAGTCTTCTCCTAATTCCTCTACTATTATTCTCATTTATGTT GATGAATTAATTCTTGCAGGCAATAGCTATACTGAAATTCAACATGTTAAGCATATTCTAGACCAAGCCAATAAGATTAAATACCTAGGCCATCTTAGGT TCTTCCTTGGCCTTGAAGTTGCAAGATCCAAATTAAGCATCCAACTCAACCAGCGAAAATACACCTCATCTCTCTTAGAAGACTCAGGTTGCCTTACTGC CAAACCTATCAAGACTCCTTTTGATCCTTCAACCAAGTTACAGATCACTGAGGGCACTCCCTTACCTGATCCATCTTCCTATAGGTGCCTTGTGGGCAGG CTTATATACTTGACAAATTCAAGACCTGACATTGCCTATCATATTCAACAACTTAGCTTGTTCATGTCCAAGCCTCTTGATTCTCATTATAGGGCTGCTC TTAGAGTCCTTCATTATCTCAAACTCTCTCCTACACAGGGTATTCATGTTTACTTTTAGTTCTACAATTTGGTCGTGCCTCGCAACTTGCCCCGATGGCT TAAGGGTACAACTGTAGAAGGCTACAAGGCCACAACAATAACATTATGTCTATCTATAATTATACAATTAGAAATTGGTATAATTATTAAATATATGACG TTGTCCAGTGTAGTGATATGATTTTTTAAATTAGACTATATATGAGACTTCTACGAGTTTTATCCCCAGATTGGCTTTCACAATTCTGATTTTGGTTAAG TAGTCTTAATGAAAGTTGAATTAGGATTAGAATTAAATTGGATAAGAATTAGCATTTAAGTTTATATCATTTGTTCAGGCATAATAATACTGATAATAAT AATAGGGGAATCAAGTTACTCCAAGAGTAAGTTTAAAAGACTTACTCCTCATCGTATACTATCAATTCATTGAAAATCCAATGATTTAGATTTACC
• Tissue: flowers
• Gene name: LI_gene_52972;
• Additional information: details;

Expression of Ll_transcript_126412

FPKM

• FPAB: 0
• FPNAB: 0
• LF1: 0
• LF2: 0.5
• LF3: 1.6
• LF4: 0.6
• UF1: 0
• UF2: 0.3
• UF3: 1.6
• UF4: 0.2

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_126412

• Blastp: Retrovirus-related Pol polyprotein from transposon TNT 1-94 from Nicotiana with 31.98% of identity
• Blastx: Retrovirus-related Pol polyprotein from transposon TNT 1-94 from Nicotiana with 32.99% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_017415205.1)
• Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) (PF07727.13)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;