| Id Trinity | FTRINITY_DN55616_c0_g1_i8 |
|---|---|
| Name Transcript | Ll_transcript_125340 |
| Sequence | CAAGGAGGGTCCCTACAACGAGCAACAATCTCTCGAAGAGATTAGTTACTTGCCTTACGACCATACTTGACTCTTAAAACTCCATTTTTTTTTGAAAATT TCTTTTTCATAATTTTCCAATTACCATTACCACTCTTTGTTTTTATTAATTTAGGACTTGCTTTGTGATGTTTCAGTTTACATCGTCATTTTGTTCCCCC ATAATGAGGAAGAGTGAAACTTTAATTTGTGTTCCTATAATGGGGGATTCAATTGACATTATGAAGATTAATATCAACAAAGCTAAACTTGCTGGTGCTG ATCTCGTTGAAATTCGATTAGATTCTTTGAAGATCTTCCACCCCTCTCAACATCTCAATACTCTTATTAAAGACCGCATTTTGCCCCAGTTGTTTACTTA CAGGCCAAAATGGGAAGGTGGTATGTATGATGGTGATGATAACAAACGATTGGATGTGCTAAGATTAGCCATGGAATTGGGAGCTGATTACGTTGACGTT GAACTTCAGGTTGCAGATCAGTTCTATGACTCTATACGTGGGAAGACACTCAATAAAACCAAGGTCATTGTTTCATCTCACAACTATCAGCACACTCCCT CAGTTGAGGATCTTGGCAAACTTGTAGCAAGAATACAAGCAACCGGGGCCGACATAGTGAAGATTGCAACAACTGCCGTGGAGATCACTGATGTTGCACG CATGTTTCAAATAATGGTCGATTCCCAAGTAAGATGCGTATGTAACATTTTTTTATCTGGTATTTTTTTTCTTAGTTGCAAACTTAATTTGCAACAAAAT TCATATATTGTTGCTAACATATTTTGTCAGCTGACAGAAATGGAAGATGAACGATGAACAGATAGTGTACAAAATTTAGGACAATAATTTCCGAGCTTCT CATGAGTCATTCTAACAATGGAAACTTTGATCTCTTATACACATCTTATCTCTTATAAGCTATTGACCTTACACATTAGTGAACTTACACTCTTCTGCTT CTGATTATATTGAGTGGCAACACAAAAATTTATGATTGCTTTGTTGTGGCCTTTTTATATGATTGTAAATAAGTTTAGCATGACCATTTTTTGGAATTTC CAGGTTCCATTTATTGGGCTTGCTATGGGTGATAGGGGATTGATTTCACGTATACTTTGTGCAAAATTTGGTGGTTATCTCACTTTTGGTACCCTTGAGT CAGGAGTAGTTTCAGCTCCAGGTCAACCTACAATTAAGGATCTTTTGGATCTATACAACTTTAGGCAAGTGGGACCTGATACAAAAGTATATGGGATTAT TGGAAAGCCTGTCAGTCACAGTAAGTCACCCATATTGCACAATGGAGCCTTCAAGTCAGTTGGTTTTGATGGAGTTTATGTATTTCTATTGGTGGATGAC CTTGCCAATTTTCTCAGGACTTACTCATCAACAGATTTTGTGGGTTTCAGTGTCACCATTCCTCACAAAGAGGCAGCAGTTAAGTGCTGTGATGAGGTTG ACCCAGTGGCTAAGTCAATAGGAGCCGTGAATTGTATTATAAGAAGACCAACTGATGGGAAGTTGATTGGATATAACACAGATTATGTTGGCGCTATTTC TGCTATAGAGGATCGACTACGAGATAGACATAATGGTGATGGCACAGCTGTTTCACCATTAGCTGGTAAGGTGTTTGTTGTTATTGGAGCTGGTGGTGCT GGGAAGGCACTTGCTTATGGTGCAAAAGAGAAAGGGGCAAGGGTTGTGATTGCAAACCGTACCTATGATCGTGCCAGAGAACTTGCTGATGTAATTGGAG GAGATGCTATAGCCCTTGCTGATTTAGATAATTACCATCCTGAGGATGGTATGATTCTAGCAAACACAACCTCAATTGGAATGCAACCAAAAGTTGATGA AACACCTATTTCTAAGCATGCTTTGAAATCTTACTCCCTGGTTTTTGATGCCGTATACACGCCCAAAATGACTAGACTCTTGAAGGAAGCGGAAGAATCT GGAGCCACTGTTGTAACAGGATTGGAGATGTTTCTTGGACAAGCATATGGACAATTTGAGAAGTTTACTGGAATGCCAGGTAAGTTGAGTGTAAAGAAAA TACTAGACTAATTTAAATATACCTTTTGACCTCTCGTTCTGTGGTTTGTACTTAATTCGATTTGATTCGTTTGGAAGTCTTGTTTTTTCTGTTTGATTCT TTTTTCCCGCATTTGCAGCTCCGAAGCAGCTCTTCAAAAAAATTACGGAAAACTTGTGATGAGGATGAGACCAATGATGCCAAATGTGTAGCTGTGAAAA TGTAATGGTTGTTTTTATTGTTGGGAGAAATTTGTTGGTACATATAGGTATGAGATATATTTAGTGTTTGTTGGCTATTGTAATTTACACTTTTAATTAT TGTGACCTTAGGCCCAATGGGCTTTAACATATCAAAAGAAAGAATAATGTTAATGAAAAGTTTAGACAATTAATTGGGTGAGAGAATTGAAAGAATGAAA GGGAGâBLAST |
| Tissue | flowers |
| Gene name | LI_gene_52997; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_125340
| Blastp | Bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic from Arabidopsis with 75.99% of identity |
|---|---|
| Blastx | Bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic from Arabidopsis with 70.21% of identity |
| Eggnog | shikimate dehydrogenase(COG0169) |
| Kegg | Link to kegg annotations (AT3G06350) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019431914.1) |
| Pfam | Type I 3-dehydroquinase (PF01487.14) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |