| Id Trinity | FTRINITY_DN55648_c1_g2_i11 |
|---|---|
| Name Transcript | Ll_transcript_126716 |
| Sequence | CTCAGTTCCTTCAAAAGAAAAAACGCAATCACCCTATCACGTTTTCTCGTCGGGTTTTTCGTCTTTCGGAATCTGAGCCTCTTACAACCCTAATCCACGT AATTCCGCTCCTTCTCCCTACATCCTCGTACCCCAAACACCAACTTCAATACCCTTCCGATTTCATTTTCCCTAAAAACTTAGGGCCACCTACCCTTAAC AAAAGAAAAAAAAATGAGTTTTCAGGACATCGAGGCTGGGAGGCCTTTCGCTTCACGGCGGAGCCTAATCAACGGTAAGCAAGATCCGACGCAGGCGGTG GCTTCTGGAATATTCCAGATTAACACCGCCGTCTCCACTTTTCAGAGGCTCGTTAATACCCTCGGTACCCCTAAGGACACCCCCGAACTCCGCGAGAAGC TGCATAAGACGAGATTGCATATTGGACAATTGGTGAAGGATACTTCGGCTAAACTTAAGGAAGCTAGTGAAATTGATCACCATTCTAATGTTAATGCGAA CAAGAAGATAGCAGATGCCAAGCTTGCAAAAGATTTTCAGGCAGTGTTGAAAGAATTTCAGAAGGCACAGCGTCTTTCTGCTGAGAGGGAAACGGCTTAC ACTCCTTTTGTTCCACAAACAGCTCTTTCGCCCAGGTGATTAATGAATCATTTTTGGAGTCTAAAACAGTGGAAGATTGTGCTTTATGTGTGTGTAGCTT ATGGTGTTGCAATTTTGTGGGTGATCAGAGTATATACGATGAAGAATATCTTACTTTAGATGAACAGTTGTGCTTCTGTAGTGGCTTCCAATGTGTTGTT GCTAATGAATTATTATTACTTATGCATACAATGGTTATGAGATGGACCTTTCTTTCTTGCTTGCAGCGAACTAGATGTTAGTTCTGATAAGCCTCCTGAG CAGCGTGCCCTTCTCATGGAATCCAAAAGGTGATTTCTACTATGTTATTTATTTGATAACAAATGAATGGTTTGCCATTTTTACAAGTTGATTGCATTTT TTCTGATAAGACTTCTGATGTCCTCACCAAATTTGGATATTATTACAATAATATGATATATGATCCTACAGGACAATATTTTGAAATGTAATTTTAGGTC AAATATCAGAGGTATTTGTTTGCATACTTGTTTGATGCTGGAATATATTGCTACCAAAAGTACCTTTATTTTTCTTTTGTTTTTTGGTAGCAAATCTGAT GTAGTTGGCAACATATAAATGACTGGTTTCTTATGTCATTAAATTTGATGAAAATCTTGATACAAATTTATATATTAGAGGGTTACTTCTCAAATTCAAC ATATTATTCATTTGTAAGTAGATTAGGCTGAGAGATCTAGGTAGTCAATTGCGAATAGCATAGTGGCTGACCCCAAAGACACTATAACGGATAGCGGGAC AACTACTACAACTAAGAAAAAAATATAAGTAATTTATAGCCTACACATATAAATACTAAAATAGGTCATATTAAAGACACATTCCTAATTAATAATCTAG ATAAGAGCATTACAGATTCTAGAGCTGATCGAAGTTGGAGGCCATAGCGGAGTTGAATCTCACGAAATTGAACCACATGAAGATGATGCAAAGTGGGGTT CAATCAGTTTGATAAGAGAATCAATAAAGAGATGATGGGGCAAACAATTAGGGGCCAAGGAAAAATCATGTTGAGAAAAGATGGGGTATGTTTGTGAATT AGGAAATCTTAGCAATTTTGTTCTATTTTGATGAAGAACGTGTAAGCAACCAAACATGTATACTGAAATTAGGAAGAAGAAAGAGAAGTAAGAAGAAATG TAGAACCGAGTAAAGATCACATGGCCTAGGAAAATCAACGTGTTAAGTTGAAGGGAAAGGATGAGAATGTTAAATTACCTAAAACCCTAGGGGGGAAACC TGCCACCTATTAAGAAGCGGGGGTAAAAAGGACCTTTCCTCTCTAAAATTAGGGTTCCACCTGCAGCAAAACATGTAGTGGGTCGTGTCCTGCTATTTGA CCTGCCATTCGGCCGCTATTTAACTTGCTACAGGCACTACGGCCATCTGCCCCACTATCTACTGTGATGTCACGGGAACAGCCAAAACCCTGCTACACTC TGCTGTAGCGGAGCTATAGTGTGCTATTGACTACCTAGCCTGAGATGTGTTGTTAAGGAAAGGTTTTTATTGGTGCTACACTCTGCTGTAGCGGAACATG ATCAATGGCAGGATCCTGTCACTCGTCACCACATTTGATGAAAAACTGAACACACGTTTGTATTATAAGAAGGCTACTTTTCAAATTAGATAATTGCATT TGCACTATTTTAGTTCCTCAGCTGCATTATTCACACTGCAGGCAGGAGGTATTATTCTTAGATAATGAGATTGCCTTCAATGAGGCTATCATTGAGGAAA GAGAGCAAGGAATTCAAGAAATTCATCAACAAATTGGTGAAGTAAATGAGATTTTCAAAGATCTTGCTGTGCTTGTCCATGAGCAAGGAACAATGATTGG TAACTTTTCTTTTAACCATTTGTTTTCGCTAGTTACACATGTCCTTGTATTAACTCAACTTTTTATTTCTCTGGAGTGGTTCATGTTATTTGACGTCAAG AATTTCCATTTTGTAGACGATATTGGGTCCAATATCGAGAATTCCCATGCAGCAACCGCACAAGCAAAATCTCAACTTGCAAAAGCTTCAAAGACACAAA AATCAAATTCGTCTCTGGTAATATTTATTTTTTCTTATTCAGCTATATTATTTATTTTAACCCCCCGTCCTGTCATTCCCTTAAGACCTTTGGTTGCTTC CAGTATGGTTTTCGTTTTGAATAGTGCATACCATTTTTGTTTTATGTTGGGAGTGGGTGATAGGTACTCGATAGGAAACAGGAATGAATACAGAGAGTTA ACTGATTCAGCCCCATAAAATTCGATAGTCCTGACTCTCCTTCCTCAAAAACTGTGACACTTTATTCTGTTTCGTTAGATATATCTTGCTAGTTGTTCTC TAACTAACTAACCCTGATTAAGTAACTTACAATTGGGAGTCTACTAATGGAGGGATTCATTTTGGAGTGGGGGTAGGAGATGGTTGTCCACATGGATTAT GTAACGATACTTTCTGTTCAATTTCCTACTTCTGGGAGTTGATGTACATCATCTATGATGATCTTTGATGACACCTTTCCTTTATCATTTTAAAACTTCA TGTAATTTTCTTTGCTAATCTAGTTTGTTCTATGTTTTTCCACCTTTGCAGACGTGCTTGCTTTTGGTGG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_53260; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_126716
| Blastp | Syntaxin-22 from Arabidopsis with 81.88% of identity |
|---|---|
| Blastx | Syntaxin-22 from Arabidopsis with 81.88% of identity |
| Eggnog | SYNtaxin(COG5325) |
| Kegg | Link to kegg annotations (AT5G46860) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019424433.1) |
| Pfam | Syntaxin-like protein (PF14523.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |