| Id Trinity | FTRINITY_DN55664_c4_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_125522 |
| Sequence | AAACCATTAGATTTCTTAAAAATTGATGACTAAGATGAAGATTCTTTTAGAAACTTATTCTCCCTCATTCTATAAATATTGTTCATTATATTATTAATTT TTTATTACTATTTTTGAGTGAGTAATGATAAAAAATGAATTAGGATGATCAGGAATATATGCATGCTTGCTTCAATTTTCTTACCGCCACGTCATGGGGT ACATGATACATCACACACGATGAATAGAATGAACGCATGAATTCAACTTTTGAAGCACTCACTCATTGGTTAGATCGCAGCAACATAGAGCGATAATCAA CAATGACGAAGCGATCCTACAAAACTGAGTTAGGTTGCATAGCTTGCGATGAACTCGGCGAACTCGGTGCTGGAAAACCGGGTTGGCTAGTTGACAATCC CAACCTTCTCTCCGCCATCGACACTCACTCCCTCGCCCTCGCTAACCGCTCTAATATCCTCATCCTCTCATGGTCCGACCCGGATTCCGACCGGGTCAAA ATCCGACCCGATTTATCTCCGATTCATGCCGAGCATATCTCCGCCATCGAGTGGCTGGTTTTTTATGATGTCCGCGTCATCGTGGCGGGAACATCGTGTG GCTTTCTCTTCTTTTACTCTTTTCGTGGTGATTTGATTCATAGACAGGTAAATTTTTTGGTTTATTCCATTATTACCCCTTTACCTAACTTGTTGAGGAA TTGAATTATCTGTTTTCTGCTGAGTAAGGCTATGGACCCATGAGAAAGTGGTATTATAGTTTAATCATATGTAGTTGGCAATAAAATGAGTCATTTTATC GGCATATTCAGTTTCAGTGTATTATTTGTGTGGGATTATGTTGAATCAATCTCTGTTGCTGTGAATGGAGAATAGATTTTCCGGAGAGGATCCGAATTGC TGCGTTTTTAAAAGGAAGAAAAAAGTACAGTGAAACGTCAATCTGGTCCATGAGATTATGGAAATGTTAATGTAGTCTGACTTTAGACACTGTCAATAAT TCGGTACCTGTGAGAAACTTGTAAATTTTCTCTGGCAATTTACTACAATGTGCAAGGTCAGGGATCTAATTGATGTATTTGAAGACAAAGTTAATCGATG GTATCAATTGATATTTTAATTGAAAAGAAAATAGGGTAGCATTTGGCACCAGAGCAGAAAGGATGCTTAAAAGTTAAAAGATTGGAATATCATGTTATGT TCTCTTTGGTTCCACCCTTTTAGTGAAGCAAAATATGTCTCACTTTTTAATTCTCGTGTCTTGTTTCTTTATATAATAAGCCAAACATAGAGCCATGTTT CTGTTCTTTGTTGTTCTAACAAGTCTACAAAAATTTGCTTCAAGATATGAATTGTATGTGACAATTTGTGTTAGAGTCCCTCTTATTGACATGCTTAAAT ATTGACTGATTGTTAGTTTCCCCAAGCAGCAATTCTCCCTCGAATAGGTTAACATATTTTTTGTATATCTGGATAAGTACTGGGTGTTTATAAAATTTCT CTATTACAGTCTTCTTGTCGCGTTAATATATAGGGAGAATTTCATTTTAAGACCTGAAAAACATTTATTATTCTGTAAGACCAATATGATCATTTAGCTC CCAAATTGGGCCATTAGAAAGTATTTATTCTCATGTCCATGACACGATAGACAAACTTTTTAAAATGATCAAATTATTTGCTTTGATGATGAATCTCTAG TTTGCCAATTCAGCCTTGAACATAATAACCAATATAACTTTCAGGTCCTTGATTACAACGCTCCTTAAAGTTTATTTGAATTGATTTTATTGTTCTTTCA AATAAAATTTTAAATAGAAATAAAATAATTTGGGTGCAAGTTTAAGATTGGAATATTGATAAGGTTTACACATCGGAATATCATATTAAAAATGAGATTC TATATGAAAGTTTACAAGTACATGCATATTTGTTCAATTTTTGCATTGTTTAGTCTTATATCAATTTGTTCCCCCATAGATGATTTATCCTGGACAAGTT TTAAAGTTAAGAGTTCGTGGAGTAAAGAAAGATTTGATTCAAGATACTTCCTCAGAAGAGTTTTGTGTCATTATGCCTGGTGTAATTGCCCAATTTGATG GCTCTGATATTCAGAATATGCTGCAGAAATGGTTTCAAGAAGCACATGCTCAATTTTGGGGTCAAAAGCCAAAGAGCCACGATTTAGAAGATTTTGAGAA TTCTTATGGAAAATTACCTCACCAATTATGGAATATCGGCAAGTATGGTACTTGTGCTGACGCAGCACTCACTGGCATAATGCCTCCTCCACTAATGGAA TACCAGTCAAGTCAACATTATTATTGTGCAGTGGCTGTTGGAGAGGATGCTGTGATTTCAGCATACAGACTTTCTGAGGACAAAGGCAGGTCTTTAGTGG GAGCTATCTTGTCTAAAGTTGTACCTGCAACAGTTTCCACAATAGCTTCTTTTTCTAAAATGATTTGGCGGAGTGAACAGACTTCTCCAAAGAAATCAGA ACAGAAGCCTCAGTCATTTGCTCGAGTTTCACCCCTGACATGTTTAAAGGATCACCCAAGGAAGGGTGAAAAGCTCACCTTATCTCCAAGTGGTACTTTG GCTGCTATAACAGATTCGCTTGGTCGCATATTGCTGCTTGATACTCAAGCACTTGTAGTGGTGCGCTTATGGAAGGGATACAGGGATGCAAGCTGTTTAT TCATGGAGATATTGGTGAATAAAGATACTGCATCAACAAGCTCTACGAATCGTGAACCAGTGAAGAGTGATTACTGCTTGTGTTTGGCTATTCATGCACC TAGAAAAGGAATTATTGAGATCTGGCAAATGAGAACTGGACCACGTCTTAGAACGATTCGATGTAGAAAAGGTAGCAAAATGTTGCAACCCTCTTATAGG TTTGGCGCATCGATGTCCTCTCCCTATGTCCCTTTGGAAGTTTTCTTGTTAAATGGAGACTCGGGTGTGATATCAGTTATAAACAGGAACATGGACTCTT GATGTGGTGATTTTTCTTCTTTTTCTCAAACGAGATATTATGTATTCTCATATTTCAATATAGTAATGGTGATGATTGTTGCCTTATGCCAATACCCTTT ATTTTTAATGAAAATTATATATTACCGAAAAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_53388; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_125522
| Blastp | Rab3 GTPase-activating protein non-catalytic subunit from Rattus with 27.9% of identity |
|---|---|
| Blastx | Rab3 GTPase-activating protein non-catalytic subunit from Rattus with 26.83% of identity |
| Eggnog | RAB3 GTPase activating protein subunit 2 (Non-catalytic)(ENOG410XTJ2) |
| Kegg | Link to kegg annotations (289350) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019464919.1) |
| Pfam | Rab3 GTPase-activating protein regulatory subunit N-terminus (PF14655.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |