Id Trinity | FTRINITY_DN55680_c3_g1_i1 |
---|---|
Name Transcript | Ll_transcript_126320 |
Sequence | AAAAAACCCACAAATGACTTTTGGAGTTGCATGATTTTAATTTTTTAGGGGTGGTATACCAAATTATATTACTTATTACCATTTGTGATATAAAATTTTT GTTTGATTATCATCCTACTACATTATAACAAGTAGTGGTCATCATATGTAGATTGCCTTTACATTTGTTTCTCCATGTTTAGAATTTTACTCTCCTCTCC TCAATAGGTTGCAAACTCAAATGTTCGTCAGAATGCTTTGCATCTATTTTTGGACATATTCCCTCTAGAAGATCCCAATGCCACAAAAGAAGAGAAAGAT ACATTGCTTGATAAGCAGTTCTTTTTATTAGAAAAGTTACTTATGGATGATTGTCCAGAAGTGAGGACAATTGCTGTTGAGGGTTCTTGCCGAGTCCTTC ATCTATTTTGGGAAATAATCCCTTCACCAACCATAACAAAGATAATTAAAAAAATATTTGATCACATGTCTCATGATGTATGCAGTGAGGTCAGGCTTTC TGTGTTGAATGGCCTCATTTATTTGCTTGGCAATCCCCACTCTCATGAAATCCTTAAAGTGCTCTTGCCAAGACTGCAACATCTTATGCTGGACAATACC CTAACAGTACGAGTTGCTGCAGCAGATCTCTTAATTAATCTAAAGGATATCAGAAATTTTCAATTCAACAAGGTGGTTGAGCTAGACGTGTTATTGTCTG TGCTTGCTAGTGATCAACCTTCTGTAGCTCAGAGAATAACAAAATTGCTAATACCTTCCTACTTCCCTTCAAAAGTACCCATTAAGGAGGCATGTAATCG CTGCATTTCACTTGTGAAAAGGTCTCCAGTGGCTGGTGCAAAGTTTTGTAAGTTTGTCATCTTGGAAGGAGCATCTAAAACTCATCTGATGGAACTGGCG AAAGTACTTATGAGTTTGGTTTTGTCACCTGATAAGCTGGATTCAAATCAGATTGAGGGTTTTCTTGTTGCTGCTAGCTACCTTTGTGATAATTTAGTCA ACGAAGTATGCTATAGAAATGCCCTCAAAGAATTATTTACTGAAGAAAAATTGAAAGGCTTACTCACTGTAGTATCCACAGGGCAAGCTCAATCATCTCT ATTTAATATTGTTTCTGCTGTCTGTCCGGATGGTGTTGATGATTTACTTGAACAATGCATGGATGTTGTCACAAAAAGCATAGGTTTACCCGAAGATGTT GATAACCAATCTAAAATGAGGTCTGCGCATAAGATGTTGCTGTCATTGGGTTGTCTTGATGATATGTTTGAAGCCTTAACAGCCCTCTTGCATAAGGCTG CCTATCGCTGTCATATTAAATTTGGCACCGAAATGCCATCACATGGTTTTTCTTCTGCTAAAAAGAATAAATCTAAAGCATCTGGAAAGTTTTCAACAAA ATCGAAGGTTATAAACAGAAGGCAATCTTTTAAGGATGATTATTTAGTTGCTGTAGGGATAGCATGGCAAGTTAGAGAATTGCTTCTGCATGAGGATACC AGAAAAGCTATGTTGAGATCTCCAGTTTTAGAAATGTCATTTTTTTCTCTTAAGATGATTTCTGAGGTCAGCATTGTGCATTGTGGGCAAGAGGAATATA TGGACATTTATCCTGTTTTAGCATATCTGACCCTTGCTCTGCAAATGGCAAATGACAGTGATAGCACAGTTGGTATGCACAACAGTGATAAGAAGAGGAA CAAAAATAAGATTGATTCTTGTACATCACTTTCAGAGACTGTCTTGGAGATTACAATAGAGCATGTGCTCAACTGTTTAGAAAAACTATTTGGAGCAGAT GGTGTTAAAAAAAATGGGAAAGTTGATTCAGATAATTTGCCATCTTCAAGCAGAACTTTTCGAAATTCTGCTAAAAGGTGTAGGTTATCTCCTACAATTG AAAGCCAGCCGAGTACTATTGGATCTGGGTACAATGAACCCGAACAAGTATCATGCAAGGTGAAGATGCTTGCTGCTGTTCTTAAGTTCACAGCTGACAC GACTGCAGTGTATTTTGCTCCTCACAACCATGGATTATTCTTAAATTACACATCAAAATGTGTGCAATACATCATATCTTCATTGGATCAGCTATATCGT AATCAGATTCAGTTTAAGGAAGAGGATCTGAAAAACACATTCTATTGTGTGAAAAGCTCTTTCACCTATGCAACAAAAATGCTCAATATGATACTTTCAG ATTCTAGTGATTCCTCCACAAGTCCTCCAGAACCTTTTGCTCTTGTGAATGATTTACTTGATTTAATGATTTTAGTTGAGTCATACATGGGCTCAGGGTA TGCATCACGTCTTTTATCAGCAGCACAACCCTGGCTACCTGATTTGGCTCTAGCGTTAGGATCTGCAAGTATTCTAAAACGTAGTGAGAGTGGTAGGAAA CATTCAATTGCATCTGACCAACTAAAGTTACACTTTCCAAAGTGGCCCTTGATTGTAGCCAAGACTGAGCTATCCAAAGTAAATGAAGCTGAAGAAGATA ATGGATCTTCTGAACAAGAGAAATTCTCTGAATTCAACAGACTTTTCGCAATGCTGATTGTATTACTGAAAAAGAATCCCAGTATAATGGATGCAGTTGG AGATATTTTCTTGGCTTCTTCACTTGTTGGGTTGGAAAGAAAAGACTTTGGACTGGCATTAGGACTCTTGCATTTCGTGCGTTTTAAGTTTAAACTAGAT GACAAGGATTGGGGTGACATGATGCTGTCTTCTCTGCAAGAAATCTATCCTAAGATAAAGAAGGAAATTACAGAAGAAAGCCAAGAAGATGAACTTGAGA AATTAACATCTGCAAAGGAGTTGATTGAACCTCTTTGGATGTATCATTTATATGAAACTGGAAGGGTCTCCATGACTGATGACTAGAGAAGTAGACTTGT TTTCCTTTTTGCTCCCTTTGTAACAATTTGAGAGCATAATTAATGAAGAATTGAAGACCTTTACATGTCTGATGTAAATACTTTTCTGCCATTTCAGTGC AACTGAAGTGGCAACATAAAAGGACAATTCTTGCCACAATGTGGTATTCTTTTGAATTTTACAGATTTTTGCTACTGCT BLAST |
Tissue | flowers |
Gene name | LI_gene_53516; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_126320
Blastp | Condensin-2 complex subunit G2 from Xenopus with 35.14% of identity |
---|---|
Blastx | Condensin-2 complex subunit G2 from Xenopus with 37.55% of identity |
Eggnog | - |
Kegg | Link to kegg annotations (446284) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019421022.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |