| Id Trinity | FTRINITY_DN55681_c1_g1_i8 |
|---|---|
| Name Transcript | Ll_transcript_124608 |
| Sequence | CACAATATTACCGGATCGAAAATGTTGCATCCCTTAAGACTTTAAACGCAACACCAACCGTCGGATCACGCTGATTTTCTGATCACGGTCGTTTATATGT TCCCCTCGTCTTCTCTTTCCATTCCTTTGGTTCCTTTGAGTGCCAACACAACCGCAGCCACAAGAGAAGAACGAAGAAGTAGCAGCAACACCATTCTGGA GGAAGAAGTTAGGGTTGTGTGATTCGATGGAGAAGGAGTTGTTGGAATTGTATGAATCGGCGAAGAAGGCAGCTGATGCGGCGGTCTCCGGTGACGGAGA ATCTGATGAAAGTAGATGTATTGATGCGCTTCAACAGCTCAAGAAATTTCCTGTTAATTACAAGATTCTCGTCAGCACCCAGGTTTTGTTTCTCTTCGTT TCTCTCATCTGTTTTTTCAAATTTTGATTTTGATCTGTTTTTGCTCTCTTGTTTTTTATTTGGGTTGTGTTTTTGTGTTGGGTGAAGCTGTGTTTTTTAT TTTATTTTTATGATAAAAAATTGGGGAAATTAATTGGTCATGTGAAGTGAGAAGAGAAGCAAGTGAATGTTATATTGTGTTGTGTGATCTTGTTATGGTG CAGCTTGAGTGGTTTTGTTTATTTTGGTTTGTGTTATAAAAAAGGTCATAAAATTATAGTTATCTAAGGTTTTCACTTTTATGTTCTCGAAATTTATTTT GACCTTTCTTAACCTTCAAAGTTTAGTTTTGATGTCTCTCGTAGAAGCTTTTTTTTTTTTTTTTTTAAATCCGGGAAATCCATTGCTTAGGTGAAGTGTT AAGAGAAACAAGTAAGTGTTATTTGTGTTGTGTGGATGACTTGATGGGAAAGGTTCACTTTTAATGAATTTATAGTTTGTAGTTAAACGTGACCAATGCT TTTCAATTTTATGTGCTGAAAATTGCTTGAGGGGAAAATTTCAAATGTCAATTGTCATATTCATTGAGAAATTCACTCTTTGTATATTTCTGAGGATGCT TGTGGTAATGATTTATGCATGGATACATTGGGACACGAGTATGAACTGTGGTGAGTTTGTTTAAATTTGATTATCATGTCATGTTTGGTTGCAATAACTT CTCAACTGAACAGAAAGTCACAATGTGACTTTTGGTGCAAATCTAATATTTTATAGCTTCTTGTGGTTTTCGTTGTAGCTGGGATTTGCATTTTGTTTGT GATGGTGTGTAATTCTTGTTTTGATGTTGGTCCTTCACTCCTTCCCTTTTTCAATGGAAGTATAGGATTCATATCCATCGATGTACATGATGTACTTGAG CATGAGGAAGAAGCAGAACTTCATTAGTAGTTATTATTGTTTTATCTGTCTTTAAGCTGCACGTATGGCAGTTCCCTTTTTCTCTGTTTCTGGGCATTAT GAAATGTCGCTGCTGTTTCATAATTTGTTTATTTCAATTGTAAAACCTTGTAGAAGTTTTGTTCATTCTTTCTTCCTATTCCCATTTCCTCTCTTCTCCT TATGAGAATGTTGTAGCTGGCTTCTATATATATTAACAATCATCTTTGTCATGTGATGGCATACTGATAACCCCAAGGTTCAGTTTGGTATCCCCTTAGA TTGAAGAGAAAAAAGATACGGGATGGGTACTTCCTGAAGACTATGATTAGAAGGGAGATCAAACTGACCCCAATTCCATATCGCTTTCATGTACTGTATA ACTTGAATGTTTGTTTTGAACTTCTGCTTTTAATGTAATCTTTCAGGTAGGTAAACATCTTAAATCCCTGACGAAGCATCCAAGGCAGAAAATTCGTGCC TTTGCTATTGACCTAATTGAGATATGGAAAAACATAATTATTAAGGAAACAAGCAAAAATAAGAATGGGGGCTCTGATAATAAGGTTGAGCCAGCTAATG GGGAGAGCGCTAAAGCTGGAAAATTTCAAAGGAGTCTTTCTGTGAAGGTTGAGAAGACTGAAACTGTCAAGGTTGAGAAAATTGATAGGAATGGTACACC AAGGTCAAGCTCAGACAGTACAAAGAGAACACAAAATATGGATGTCAAAATTGAAAAAACTGACCGTGCTGCAAATGTTAAGGTGGAGAAGCAAGTTTCT GCCGTGAAGAGAACATCGTCCAGCTCTGCTGCTCCTCCGAAGCTAAAGACTATGATTAAATCTAATGATTCGGTTCGAGACAAAATTAGAGAACTTCTCC AAGAGGCTTTATCCAAGGTTCCTGGAGAGGCTGATGAAGATGTCCTGGATGAAGTTAATGTTTGTGACCCTATTCGTGTTGCTGTGACAGTGGAGTCTCT ATTATTTGAGAAGTGGGGTCCTTCTAATGGTGCTCAAAAGGTCAAGTATAGGTCCTTAATGTTTAACCTTAAGGATCAAAATAACCCAGATTTTCGTAGA AAAGTTCTACTTGGTGTTATTGAGCCAGAGCGACTGATCAACATGAGCACAGCAGAAATGGCTAGCGAGCGAAGGAAACAGGAAATTCAGAAACTTGAAA AGAAAGCTTTGTTTGAATGTGAGCGTGGAGCTCAACCAAAAGCCACAACAGATCAATTTAAGTGTGGTCGATGTGGTCAAAGAAAAACCACCTATTACCA AATGCAGACTCGCAGTGCTGATGAACCTATGACGACCTATGTCACTTGTGTTGTCTGCAATAACCGTTGGAAGTTCTGTTAGCATAGTGATGACCGGTGA GTCTCATTAGAGCTATTGTCATTTGTTGCTTATCTAGGGTATCAAGCTCAGTGTCATTATGGTTTCACACTGCAGCCATGTCAAAATTTTCTATTTAGAA CTGTTGCATGTAGAAAATTTTAGTCAGTAGTGTACTTTTTATTCTTTTAAGTTTTAACCAAAGTTATTACTTCATAGTAATTTGCTATTAATGGTGCTAA TTTTTCTGTTACAAAATTGTGTCAATGACTCTTCTCATGTTTCTGCTGGCTAGTAACTACAATACAAAAAAGTCTAGTTGATCACAACAAAATGCCCAGC TTGCTAGAACAAAGTGCACTATTTGGTTTGGACAATAGTTTTCTCTGTTTACATCCCTTTTCTTCAATTCTGATACAATGCACTCCACTGACCACAACCC TGTGTTGCAATATTTTGTGGTTATAAGATGGTCC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_53531; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_124608
| Blastp | Transcription elongation factor TFIIS from Arabidopsis with 69.27% of identity |
|---|---|
| Blastx | Transcription elongation factor TFIIS from Arabidopsis with 53.13% of identity |
| Eggnog | DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (By similarity)(COG1594) |
| Kegg | Link to kegg annotations (AT2G38560) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019417297.1) |
| Pfam | Transcription factor S-II (TFIIS), central domain (PF07500.13) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |