| Id Trinity | FTRINITY_DN55688_c1_g3_i1 |
|---|---|
| Name Transcript | Ll_transcript_124619 |
| Sequence | GAAAGGAAAGGCTTGAGAGCCCTTTCACAAGTGTATTTCATGGTTCCTAAGTCTTCATTTTTCATTCATTTCCCTCTAAAGACCAACTCGAAAATAGACT GTTAGGTGTATTTTGGCATGTAAATTATGACTATATTATTCGTTATGGCAGAAAGTGGAAGAAGCACTTCAAAAGGGTTCAGATGTTTCTATTCAGGGAG TAGGCTTAGAAGACGATCCTGAATACCAATTGATTGTGGAATGCAATGCACTGTCAGTGGATATCGAGAATGAAATTGTTATTATCCACAATTTTATTCG TGACAAGTATCGCTTGAAATTTCCAGAGCTTGAGTCGCTGGTGCACCACCCAATTGACTATGCACGTGTTGTTAAGAAGATAGGGAATGAAATGGATCTG ACGCTTGTTGATCTAGAAGGGCTTTTACCCTCGGCTATTATCATGGTTGTCTCAGTTACAGCATCGACCACAACTGGCAAACCACTTCCAGAAGAAGTTC TTGGTAAGACAGTTGATGCCTGTGATCGAGCTCTTGAACTTGATTCAGCAAAGAAGAAAGTTCTTGATTTTGTTGAGAGCAGAATGGGGTACATTGCACC CAATGTTTCTGCTATAGTTGGTAGTGCTGTTGCAGCCAAACTCATGGGGACAGCCGGTGGTCTAACAGCTCTTGCAAAGATGCCTGCTTGTAATGTTCAG CTACTTGGTGCCAAGAAAAAGAATCTTGCTGGGTTCTCCACTGCGACATCTCAATTCCGTGTAGGTTACATTGAGCAAACAGAAATATTTCAGACTACTC CTCCTCCTCTGAGGATGCGAGCATGCCGACTCTTGGCTGCAAAGTCTACACTTGCAGCACGAGTTGATTCAATACGTGGGGATCCATCTGGGAACACTGG AAGGCTTTTCAAGGATGAGATCCTCAAAAAAATTGAGAAGTGGCAGGAGCCCCCTCCCGCTAAGCAACCCAAACCACTTCCAGTTCCTGATTCTGAGCCT AAAAAGAAGAGAGGTGGTCGTCGTCTTAGGAAGATGAAGGAAAGGTATGCAATAACAGACATGAGGAAGTTAGCCAACAGAATGCAATTTGGAATCCCCG AAGAGAGCTCTTTAGGGGATGGTTTGGGAGAGGGTTATGGAATGCTTGGTCAGGCTGGCAGCGGCAAGCTTCGTGTGTCAGCTGGTCAAAGCAAACTTGC TGCAAAAGTTGCCAAGAAATTCAAGGAAAAGCATTATGGCAGCAGTGGTGCTACATCTGGTTTGACTTCAAGTCTTGCATTTACACCAGTGCAGGGAATT GAGCTGACAAATCCACAGGCACATGCACACCAACTTGGTAGTGGAACTCAAAGCACCTATTTCTCTGAAACAGGAACATTTTCAAAGATCAAGAGGACTT GAAAACCATGCACCAATCCAAATTCTTGTCCTGACTCCTGAATTATTGGTGGGACATAACAGGAAATTGTTAATACTGATGGGTATTGCTGGATAAGTTA TTTAATTTTCTCTGAATTATGTATGGAGCTAGTTTCTTCTCCATGAACACAGTGTAGACTTTTCCTTGTACATGACTATCTGCTTTATATTAGGTACCTT TTCAGCAGTAATATAGAAACAATGATCAATGTAGACCTTTTTCTTTGGGGTGGCTTGAGAACTAAAAGTGGAAATCAGAAATGTAGAAACTTTAAAACAT GTTATTAATCATAATCTATTATAAGTGTTGCTGACCAAGTTTTGTATGTTTAGAGTATAGATTGAGCTACCCCTTTTGGTTAAATATCATAGGTGCCACA GAAAGACAAAAGGTGTTGGGATACCTTTGGTAATATTAAAAACATCACAGGTTCCACGAGTTAAACTTGTTTTTTTCCTTCTGGTTCCACATTTTTTGGG GTCGGTGTGAACTAGATTGGTAATTTTGGGTTTAGCAGAAAGGATGGAGTTGAAATGAATCACATTGTATTTTCTGCTCTGGCTTTGGCTCCATACAGAA TCTCATTGTATTTCCTTTGCTCTAAGTAAATTAAACCCATTACTTATGTTTTGCCACA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_53596; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_124619
| Blastp | U4/U6 small nuclear ribonucleoprotein Prp31 homolog from Arabidopsis with 78.77% of identity |
|---|---|
| Blastx | U4/U6 small nuclear ribonucleoprotein Prp31 homolog from Arabidopsis with 77.78% of identity |
| Eggnog | Nucleolar protein(COG1498) |
| Kegg | Link to kegg annotations (AT1G60170) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019438668.1) |
| Pfam | snoRNA binding domain, fibrillarin (PF01798.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |