Ll_transcript_193179

• Id Trinity: FTRINITY_DN55705_c3_g1_i10
• Name Transcript: Ll_transcript_193179
• Sequence: GCCTGTAGAAAAACTAAAAGATGTTAAAGTTGCTGATGCATTAAAGCATCCCAACTGGAGCATGGGAAAAAAGATAACCGTGGACTCCGCTACCCTTTTC AACAAGGGTCTAGAAGTAATTGAAGCACATTACTTGTTTGGAGCTGACTATGATGACATTGAGATTGTCATTCATGCTCAATCAATCATACATTCAATGA TTGAGACACAGGACTCGTCTGTTCTAGCACAGTTGGGGTGGCCTGATATGCGGTTGCCAATCCTCTATACATTATCGTGGCCTGACAGAATTCGATGTTC TGAAATAACTTGGCCTCGCCTTGATCTTTGCAAGTAATATCATTTTTCCCTGAAACTTACACATTTCAATTCCATCAATTATCTTCAGTCCTCAATAAAA TAGATCGACGAACTTAAAATCATGTCTTCAAATTTTGTAGAAGTTAAGATGATTTTTTATAATGTCTATGATGAATAATGAAATGCATGAATAATCAGAT AATGTCATTTCTTCTCCAATTTGGCTCCTTGCAAAGCTTAATCAGGGAGTATATTTCATTCTTCATGCCATGTAATGTAGATTGGAGTTTCAGAACGATG TGATGGCATTGTTATTTGCTTCAACCTCCCCCTCCCCCTCCCCCCTCCTTTCTATGCTTCTTTGTTGGATGAAATCTGATAGCTTTCTGAAAGTTCAGTC CTGTGAATATTGTGAAGAAATAATAAGTTGGGTGCAATATATCTTTCATATGGGTTATGTCTCAAGCAGCAAAAGCATCTTGAGAAAATCATAAACTATG ATCCTATAATTTTAGCTTCTCTTTTTCTTTACAATCATGGAATTTTACTACGCAAGATGATTGATGAATCATGTAATTAGATTTAACTTGTCATAGAAAA ATTGTTGTTAGTTTATTTAACATAGTCAAATTTCAAATGTGACATTGCAGGCTTGGTTCACTAACATTTAAAGCTCCTGACAATGTTAAATACCCATCCA TGAATCTTGCCTACGCTGCTGGCCGTGCTGGAGGCACCATGACAGGGGTTCTTAGTGCAGCAAATGAGAAAGCCGTAGAATTGTTTATTGATGAAAAGAT TAGCTATTTGGATATTTTCAAGATTGTGGAGCTAACATGTGAGAAGCATCAAGATGAGCTGGTAACATTGCCTTCCCTTGAGGAAATTGTTCATTACGAC AACTGGGCGCGAAAATATGCTGCTAGTTTGCAAAGCTCGTCGAGCTCGACTCCAGTTCCTGCATGAGACTGATTTAAGAACAGGGGGGTGTGCTTGATAT TCCTGTCAATAAAGCTATATGCACCACTTCCGCTGGTTCAATTCTATAATGGTTAGGTTGTCTGTATTTAATCAGATTCTGATTTCTTAATTATACAAAA GTTAGAATTCTGAGTGTTTGTAGTGTTATTGTTGAAGAAAATCATGATATATGTGATAATTGTTATATATATTTTATTAATTATTGAAGCCCAATCAAGA AAACAACTAGATCATACTCCCCTAAAACTTTAGGACAGACCACCTAGTCCAGAAAATTTTCCTATCAGATTGTCATGTTTAATGTCTTACAACTCTATTA ATTAAAGTAGCTCTTAATGCCTATTACCGGAAAGTTGTTAGGTCCTTGATGTTGTCCTATTTACCACAATGATCATGCATCTGTAAACAGTGTTGTAAGC TAATATAATCACCAAAATGTGTTCTTTCT
• Tissue: flowers
• Gene name: LI_gene_53734;
• Additional information: details;

Expression of Ll_transcript_193179

FPKM

• FPAB: 12.7
• FPNAB: 11
• LF1: 8.9
• LF2: 13.1
• LF3: 12.2
• LF4: 12.8
• UF1: 10.2
• UF2: 12.1
• UF3: 16.3
• UF4: 16.2

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_193179

• Blastp: 1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplastic from Arabidopsis with 92.79% of identity
• Blastx: 1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplastic from Arabidopsis with 88.14% of identity
• Eggnog: Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) (By similarity)(COG0743)
• Kegg: Link to kegg annotations (AT5G62790)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019463865.1)
• Pfam: 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal (PF08436.11)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;