Ll_transcript_193175

• Id Trinity: FTRINITY_DN55705_c3_g1_i6
• Name Transcript: Ll_transcript_193175
• Sequence: GCCTGTAGAAAAACTAAAAGATGTTAAAGTTGCTGATGCATTAAAGCATCCCAACTGGAGCATGGGAAAAAAGATAACCGTGGACTCCGCTACCCTTTTC AACAAGGGTCTAGAAGTAATTGAAGCACATTACTTGTTTGGAGCTGACTATGATGACATTGAGATTGTCATTCATGCTCAATCAATCATACATTCAATGA TTGAGACACAGGTTAAACCCTTAGCTGCTCTTTTCAACATCCATATATTCCGATACATCTATATGATGATCAATAGCACCTACAAGTTCCCAGTCCTTGG CTAAATTAGCCAAGGTGTTGGTGAGATAGTGTAGTCTTTAGTTCATATATTTATATTGAAAACGGGATAGAAGAAAGGATGCAGATATCTTTAGATAATA TTATTTATCTAATGCTATAAATTATTTGTTAATTCCAGGACTCGTCTGTTCTAGCACAGTTGGGGTGGCCTGATATGCGGTTGCCAATCCTCTATACATT ATCGTGGCCTGACAGAATTCGATGTTCTGAAATAACTTGGCCTCGCCTTGATCTTTGCAAGTAATATCATTTTTCCCTGAAACTTACACATTTCAATTCC ATCAATTATCTTCAGTCCTCAATAAAATAGATCGACGAACTTAAAATCATGTCTTCAAATTTTGTAGAAGTTAAGATGATTTTTTATAATGTCTATGATG AATAATGAAATGCATGAATAATCAGATAATGTCATTTCTTCTCCAATTTGGCTCCTTGCAAAGCTTAATCAGGGAGTATATTTCATTCTTCATGCCATGT AATGTAGATTGGAGTTTCAGAACGATGTGATGGCATTGTTATTTGCTTCAACCTCCCCCTCCCCCTCCCCCCTCCTTTCTATGCTTCTTTGTTGGATGAA ATCTGATAGCTTTCTGAAAGTTCAGTCCTGTGAATATTGTGAAGAAATAATAAGTTGGGTGCAATATATCTTTCATATGGGTTATGTCTCAAGCAGCAAA AGCATCTTGAGAAAATCATAAACTATGATCCTATAATTTTAGCTTCTCTTTTTCTTTACAATCATGGAATTTTACTACGCAAGATGATTGATGAATCATG TAATTAGATTTAACTTGTCATAGAAAAATTGTTGTTAGTTTATTTAACATAGTCAAATTTCAAATGTGACATTGCAGGCTTGGTTCACTAACATTTAAAG CTCCTGACAATGTTAAATACCCATCCATGAATCTTGCCTACGCTGCTGGCCGTGCTGGAGGCACCATGACAGGGGTTCTTAGTGCAGCAAATGAGAAAGC CGTAGAATTGTTTATTGATGAAAAGATTAGCTATTTGGATATTTTCAAGATTGTGGAGCTAACATGTGAGAAGCATCAAGATGAGCTGGTAACATTGCCT TCCCTTGAGGAAATTGTTCATTACGACAACTGGGCGCGAAAATATGCTGCTAGTTTGCAAAGCTCGTCGAGCTCGACTCCAGTTCCTGCATGAGACTGAT TTAAGAACAGGGGGGTGTGCTTGATATTCCTGTCAATAAAGCTATATGCACCACTTCCGCTGGTTCAATTCTATAATGGTTAGGTTGTCTGTATTTAATC AGATTCTGATTTCTTAATTATACAAAAGTTAGAATTCTGAGTGTTTGTAGTGTTATTGTTGAAGAAAATCATGATATATGTGATAATTGTTATATATATT TTATTAATTATTGAAGCCCAATCAAGAAAACAACTAGATCATACTCCCCTAAAACTTTAGGACAGACCACCTAGTCCAGAAAATTTTCCTATCAGATTGT CATGTTTAATGTCTTACAACTCTATTAATTAAAGTAGCTCTTAATGCCTATTACCGGAAAGTTGTTAGGTCCTTGATGTTGTCCTATTTACCACAATGAT CATGCATCTGTAAACAGTGTTGTAAGCTAATATAATCACCAAAATGTGTTCTTTCT
• Tissue: flowers
• Gene name: LI_gene_53734;
• Additional information: details;

Expression of Ll_transcript_193175

FPKM

• FPAB: 0.4
• FPNAB: 0.2
• LF1: 0.2
• LF2: 0.6
• LF3: 0.2
• LF4: 0.3
• UF1: 0.2
• UF2: 0.1
• UF3: 0.2
• UF4: 0.3

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_193175

• Blastp: 1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplastic from Arabidopsis with 94.29% of identity
• Blastx: 1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplastic from Oryza sativa with 83.81% of identity
• Eggnog: Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) (By similarity)(COG0743)
• Kegg: Link to kegg annotations (AT5G62790)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019463865.1)
• Pfam: 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal (PF08436.11)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;