| Id Trinity | FTRINITY_DN55705_c3_g1_i8 |
|---|---|
| Name Transcript | Ll_transcript_193177 |
| Sequence | GCCTGTAGAAAAACTAAAAGATGTTAAAGTTGCTGATGCATTAAAGCATCCCAACTGGAGCATGGGAAAAAAGATAACCGTGGACTCCGCTACCCTTTTC AACAAGGGTCTAGAAGTAATTGAAGCACATTACTTGTTTGGAGCTGACTATGATGACATTGAGATTGTCATTCATGCTCAATCAATCATACATTCAATGA TTGAAACACAGGACTCATCTGTGCTGGCACAGTTGGGGTGGCCTGATATGCGGTTGCCAATCCTCTATACATTATCATGGCCTGACAGAGTTCATTGTTC TGAAGTAACTTGGCCTCGCCTTGATCTTGCAAAGTAATATCATTTTCCCCTGAAGCTTATACATCTCAACTCTATCAATTATCTCCAGTCGTTTTGATAA AACAGACAGATGCACTTATCATCAAGTTTTTAAATTTTATAGCCTTATGTTAAAATGAGTTTTTATAAAGTTTAAGATGAATAATCAAATGCATGAATGA TCATAGTTTCATTTCTTCATTTTTGCTCCTTGCAAAGCTTTCCCCAGGGAGTATATTTCATTTTTCATGCCATGTAATGTAGATTGGATGAAATATGATA ACTTTCTGCAAGTTTAGACATGTGAATATTGTGAAGAAATAATAAATTGAGTGCATTATATCTTTCATGAGTTAAATTTTCCAGCAGCATCTTGAGGAAA GCATAAACTATGATCCTATAATTTTTGGTTTTCTGTGTTCTTTACAAGCACAAAATTTTATTATGTATGATGAATCATGTAATTAAATTTAACTTGGCAT AGGACAAATTGTTGTTAATTTATTTAACAGAGACAAATTTCAAATGTGACTTTGCAGGCTTGGTTCACTAACATTTAAAGCTCCCGACAATGTTAAATAC CCATCCATGAATCTTGCTTACGCTGCTGGCCGTGCTGGAGGCACCATGACAGGGGTTCTTAGTGCAGCAAATGAGAAAGCTGTAGAATTGTTTATTGATG AAAAGATTAGCTATTTGGATATTTTCAAGGTTGTGGAGCTCACATGTGAGAAGCATCAAAGTGAGTTGGTAACATCGCCTTCCCTTGAGGAAATTGTTCA CTATGACCAATGGGCTCGGAAATATGCTGCTAGTCTGCAAAGCTCGTCAAGCTCGACTCCTGTTCCTGCATGAGATTGTTTTAAGATGAAGGGCGTGCAT GATTGATTCCTGTCAACTGCACCATAATTTCTGTGGGCATTGAACTGAATTGTATATTAGTATACAATATAGTGTGATGCATTCCCCAGATATTGAAGAA AGAGAATGCTTTTATTAATGGAATCTTTAGATTCTATTTAATTGATCTTCTCATAGTTTTGTTGCAATTTCATTGAAGATCACTTCCTGTATTTTCCCCC TTGAACGCCTTGATTTTATATCGAATAACTGCTTTCAATCTTCCTGAGTTCATCCATTTTTTATGGAGTTGCAATAGAAGAAAAGGTGTCACAGAAATTA TTACCCCCTTCCTCTAATGTTTTGACTGAATTCATGTTTGGTATACTTTTCTTATGGAGTGTGCAGTTTCATTAACAAAAAATTCAACATTGCATATGTA CCATATATAGTGTTAAACATTACATGCCAATATATCTGCCAAAATGAACTCAGTAGTATTTGTGGCTCATGTCTCAACCACACCAATTGACAGTCAAGTT TATCAATTTTAATGGTTGTATAAGCATCTCGTGGATTCTGCTCATACAGCATTTTCCTGAAGTTTAGCAACAGATTCTCTAATGTTTGTATTAACTAG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_53734; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_193177
| Blastp | 1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplastic from Arabidopsis with 93.69% of identity |
|---|---|
| Blastx | 1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplastic from Arabidopsis with 93.69% of identity |
| Eggnog | Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) (By similarity)(COG0743) |
| Kegg | Link to kegg annotations (AT5G62790) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019463865.1) |
| Pfam | 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal (PF08436.11) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |