Id Trinity | FTRINITY_DN55728_c2_g1_i7 |
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Name Transcript | Ll_transcript_191571 |
Sequence | GTTAGAAGTCAGAAACAGCATCACTGAGTAGTTGATTATCACACTCTCTCACTCATTGTGAATCCCCAAAACCCTAAATCCCTACAAACCCTAAATCCCA AAACCCTAAATCTCAAGCACGTTACATTACATTGTGAAAAATGTATTCGTGTCTTCCTCAGCAGCACCTTTTTCTTCACTTTCACTCTGTAACTTTCTCA AACCCGAAGGTTTTTAAATCCTCTGGTCTTCCTCTTCGGAATTTGAGGATGAGTGTTGCATCCACTTCGGAAAATCAGGCTTCTACTTATATTCCCGCTG CTCCAATTTTTCTCCCTCAAGGACCTTGGAACCAGGCGAGATGAAGATACCATGTAACTGTGATTTAACTTTCTTGGCTGGGTACATCTACCCTCCCGAG ACCCTCGGACGCTGACTGCTTGGTGACCATGAGGTCAGTGGTTTAAATCTGGAAACAACCTCTGAACATGTGGGGTAAGGCTGCATACGTCTAACCTCTT CCACTAAGTGGGAGCCTCATGCACTGGGCCTCCCGTTATTTCTTGTTTGTGCCAGAAAAAGTATGTCATTAATTCTTAAAATGGGAAGATACTGCAATAT CATTGATATGTTTCTATTTAATTGTTACTTGAAGTGCAAGCTATATGACTTTGTTTGGTAGCATCTGAATATTTGATTTTGAGATGTCAGATTCCAGGAG GAGTTACTGCTGCAGAGGGATTTAAAGCTGCAGGAATTTATGGAGGGTTGCGCGCCAAAGGAGAAAAGCCCGACCTTGCGCTTGTCACCTGTGATGTTGA TGCCATATCTGCAGGTTCATTTACAACAAACGTGGTAGCCGCTGCACCAGTGCTGTACTGCAAAAGGATATTAGAAAATTCAGAAACTGCACGTGCCGTG TTAATTAATGCAGGTCAAGCAAATGCAGCTACGGGTGAAGCTGGTTACCAGGATGTCATAGACTGCGTGGAAAGCCTTGCTAAGTTACTGAAGTTGAAGC CAGAAGAAGTATTAGTTGAATCCACTGGTGTAATTGGTCATAGAATAAAGAAGGGGGCACTTTTAAATTCACTTCCTGTGCTATTAAATTCACTATCAAC TTCAGTTGAGGGGGCAGATTCTGCAGCAGTGGCAATCACTACGACAGACCTTGTTAGCAAGAGTGTGGCTATCGAGTCTCTGGTTGGAGGGACTAAGGTC AGAGTTGGGGGAATGGCCAAAGGTTCTGGAATGATCCACCCAAATATGGCTACTATGCTTGGGGTAGTAACAACTGATGCCCGGGTAAACAGCGATGTTT GGAGAAAGATGGTGCGGATTGCTGTGAACCGAAGTTTTAACCAGATAACTGTAGATGGAGATACTAGTACTAATGATACTGTCATCGCTTTGGCTAGTGG GTTATCTGGGTTACGGTGTATATCTTCTCTAGACAGTGATGAGGCTACTCAACTTCAGGCATGCCTAGATGCGGTAATGCAAGGTCTTGCTAAATCAATA GCTTGGGATGGAGAGGGAGCAACATGCCTCATTGAGGTCACGGTGGTTGGTGCAAATAGTGAGGCTGAAGCTGCAAAAGTTGCACGATCAGTTGCATCAT CTTCACTTGTAAAGGCTGCTGTATATGGTAGAGACCCCAATTGGGGACGCATTGCTGCTGCGGCTGGTTACTCGGGTGTTCCTTTCCACCAGAGCTTACT TAGGGTGGAGTTGGGGGATATTTTACTTATGGATGGCGGGGAACCACAATTATTTGACCGGGATGCTGCTAGTAATTATCTCAGAAAGGCTGGGGAGACT CATGATACAGTTAGAATTCAGATATCCATTGGCAATGGACCTGGACATGGACAAGCATGGGGCTGTGATTTAAGCTACGATTATGTCAAAATAAATGCAG AGTACACAACATAGCCAAATCAAAATTCTCCGCATGTAGGTTTGAATAACGATCGAGTGCACACACAGGGTTTTTAGTCGTCCATTTAATAACTGAAGAA TTTTATGGGCTGCTGAAATCAGGGCATAAAGTGTTTGGTTAATAAAAATGAAATGTTCATGATCCTCTTAAGGAAGATCCATTCTCATTCTTGTGTTGTA CTGATTGATACCCTACGTTTTCTTTGTAGTTGTGTTTGAATGTTTGTCTTTTGTTGGATGGAAAGGGAACAAACTTATTTATTTTTAGTGAACAGAATCT TTCAGACATGAGTCTTAGTTTGATTTCATGTAAAAATTGGCTTGAAATAAATATTTCAAATTTTGAATGTTTGTCTTTTGTTGG BLAST |
Tissue | flowers |
Gene name | LI_gene_53966; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_191571
Blastp | Arginine biosynthesis bifunctional protein ArgJ, chloroplastic from Citrullus with 83.4% of identity |
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Blastx | Arginine biosynthesis bifunctional protein ArgJ, chloroplastic from Citrullus with 82.93% of identity |
Eggnog | - |
Kegg | - |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019440952.1) |
Pfam | ArgJ family (PF01960.17) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |