Ll_transcript_192601

• Id Trinity: FTRINITY_DN55744_c4_g5_i1
• Name Transcript: Ll_transcript_192601
• Sequence: TGAAGTTGTGTCACAATGAAAACCATTATTCCAACACATTCACTTCAACAACTTATTCTTCTTCTTTCATGCAAACACTTAAACCTTCTCTACCAAATCC ATGCCCATTTCATTGTTTCAGGTTTCCATCAACAACATCATCATTCCACACTTACCCATCTCATCAATTCATATTCTTTCTATCACAATTGCACTTTCCC ACAATCAATTTTCAATTCCATCAAAAACCCATCTTTGCTTTTGTGTAATTCAATCATTAGAGCTTATTCTAGACATAACAAGTTCAAGGAAGCTATAAAC TTGTACCATAGGATGATGGAAAATGGGGTTGAACCAGACAAGTATACATTTACTTTTGTTTTAAAGGCTTGTAATGATTCTTTGGATTTTAATGAGGGTG TGAGAATTCACCATCATGTAGCTTCTAGGGAGTTAGAATGTGATGTGTTTATTGGGACTGGTCTTGTTCATATGTACTGTAAAATGGGTCACTGGGATAG TGCAAGAAAGGTGTTTGATAAAATTCCTGTGAAGGATATTGCTTCTTGGAATGCAATGATTTCAGGCTTATCTCAGAGTTCAAATCCTCGGGAAGCAATT GGAATGTTCCAGAGCATGCAGATGGAGGAGGGTGTTGAGCCTGACTCTGTCAGCATCTTGAACCTGGCCCCGGCTGTTTCTAAGTTAGAGGATATTGATT CTTGCAAGGCTATTCATGGTTTTGTAGTTAGGAGATGTATTTACAGTGGCGCAGTTTCAAATTCGTTGATCGATATGTACTCTAAATGTGCCGAGGTAAA TGTGGCTCGTCGGATTTTTAACAAAATGCGAGCTAAGGATTGTGTCTCGTGGGCAACAATGATTGCTGGATATGTACATCATGGTTGCTTCCTTGAGGTT CTTCAATTAGTTGATGAAATGAAACGGAAAAATGTTAATATGAATAAGGTATCACTTGTAAATGCCCTATTGGCAGCTGCAGAGATGAGAGACCTAGACA AAGGGAAGCAACTTAATGATTATGCTTCACGGCTAGGGATGATGTCAGATATTGTTGTTGCTACTCCTGTTGTGTGCATGTATGCAAAATGTGGTGAGTT GATGAAAGCTAAAGATTTGTTTGAGAGTCTTGAAGGAAGAGATCTAGTTGCTTGGTCTGCTTTTTTATCAGCTCTTGTCCAAGCAGGGTATGCCAGAGAA GCATTGTCGATATTTCAAGAGATGCAGAATGAAGGTCTCAAACCAGATAAAGTGACTCTGACAAGTCTTGTTTCTGCATGTGCAGAAGTTTCAAATCCAA GAATAGGTAAGGTTATGCATTGTTATGCTATTAAAGCAGATATTGAATCCGATATCTCGACAGTGACAACCCTTGTCACAATGTACACTAGATGTGGTTT CTTTGCATATGCTACGGCGCTATTCGATAGAATGGTCTATAAAGATGTTGTGGCATGGAATACTTTGATAAATGGGTTTACCAAATACGGTGACCCACAT CATGCATTGGAAATGTTCCACAGACTCCAATTAAGTGGGATTCAACCTAATAGAGGAACCATGGTGGGTTTGGTTTCAGCTTGCGCCCTTCTAGATGACC TAAATCTAGGAATCTGCTTTCACGGGAATATCATAAAGAGTGGGTTTGAATCTGACATTCATGTAAATGTTGCTCTAATAGATATGTATTGCAAATGTGG GAGCCTTTGTTCAGCGGAAAACTTGTTTCACTTAACCAAGCCTATAAAAGATGTGGTATCTTATAATGTGATGATTGCAGGGTACCTGCATAACAGATGT GCTGATGAAGCAATTTCCACTTTTAACCAGATGAAATCGGAAAATGTGAGGCCCAACTTAGTCACATTTGTGACGATCCTACCGGCATTATCATATTTGT CAAAATTAACAGAGGCCATGGTTTTCCATGCCTGCGTAATCCGAATGGGATTCATGTCTAGTACCCTTGTGGGAAACAGTCTGATAGATATGTATGCTAA ATGTGGGCAACTCAGTGATTCTGAAAGATGCTTTCAGGAGATGGAAAATAAAGACAGTATCTCATGGAATGCGATGCTTTCGTGTTATGCAATGCATGGC CAAGCTGATCGTGCCCTCGCTCTTTTTTCACTAATGCAAGAGACTCATGTCCATGTTGATTCTGTTTCTTTCCTTAGTGTATTATCCGCCTGCAGACATG CTGGTTTGATTCAAGAAGGAAGACACATTTTCCAGTCCATGTGTGAAGAACATCATTTTGAACCAAATATGGAACACTATGCGTGCATGGTTGATCTTTT CGGCCGAGCTGGTCTATTTGACGAAGTTTCAAGTTTAATTAGTAAAATGCCAACAGAACCTGATGCTCAAGTTTGGGGGGCCCTCCTTGGAGCATGCAAG ACTCATTCCAATGTGAAATTAGGAGAGTCTACCCTCCATCACCTTCTTAAACATGAACCCAGAAACCCAACTCATTACGTAGTTTTGTCGGATATATATG CACAATGTGGTAGGTGGATTGATGCCGGAACGACAAGGTCAAATATTAATGATCATGGGATGAAGAAAAGTCCTGGATATAGTTGGGTTGAACCTCAAAA ACAAGCGCCGTGCCTCTCGAGGAAGGATGCATCTACTTTTAAACAGCTTACTTACGAAGAGAGGACATAGACATGTGTCTGATCACAATTGAATATACGA ATTTGACAAACAGAGAAAAAGAATTGTTTCTGTATATTTGAAGTAGAAGGAATGCAATCAATTTTCTTTCTTTACAATTAGAAATATGAAAGAAGCCTAC AAGAATCACCAAGTTATATGATCATGTTTAAAAAAGGTACCCATTTACATTACTTTGGGATTGATTTGCTTCTGGAAGAATTATTGGTGAGCTAAAATAG AACTGTATAAAGATCTCTCACTCACTGTGTGGTGTAACTTTCTTGGTGTAATGGTGGCTTTTCGAACCAACACGCGGGACGAATGAACAACGAAACAGGG ATTGTTGGTTTTGAGCATGAAACAAAGCAGGGACACTGGTATAGGAGCTGTCTGAAGAAGCAACCATGTTTAGAAGAGGTTAAGAATGTATTGCACAGTT GAAAGTTCATTCTACATTGTTGAAAGTGATGTAGTTATATTCATTAATTTATTATAGAATTTATTCTTTGGCTAGGTTCTATTTTCAGTTCTCACTCTGT CAACCAATAAGAGATTTAGCTCTAGCATAACGGTAAAGTTGTTTGTTTCGTGACTTGGAGGTTGTGTTCAAATCCTAAATACAGTCATTTCGCTCGCGAA ATAAGGCTGGATGCATTTACCATTCTCGATACAATTCAAATTTATCTTAGTCGTTGTGACCTACTGTAA
• Tissue: flowers
• Gene name: LI_gene_54104;
• Additional information: details;

Expression of Ll_transcript_192601

FPKM

• FPAB: 0.2
• FPNAB: 0.6
• LF1: 0.6
• LF2: 0.3
• LF3: 0.3
• LF4: 0.2
• UF1: 0.4
• UF2: 0.3
• UF3: 0.3
• UF4: 0.2

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_192601

• Blastp: Pentatricopeptide repeat-containing protein At2g39620 from Arabidopsis with 45.91% of identity
• Blastx: Pentatricopeptide repeat-containing protein At2g39620 from Arabidopsis with 45.79% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT2G39620)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019452105.1)
• Pfam: Pentatricopeptide repeat domain (PF13812.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;