Id Trinity | FTRINITY_DN55744_c4_g5_i5 |
---|---|
Name Transcript | Ll_transcript_192609 |
Sequence | TGAAGTTGTGTCACAATGAAAACCATTATTCCAACACATTCACTTCAACAACTTATTCTTCTTCTTTCATGCAAACACTTAAACCTTCTCTACCAAATCC ATGCCCATTTCATTGTTTCAGGTTTCCATCAACAACATCATCATTCCACACTTACCCATCTCATCAATTCATATTCTTTCTATCACAATTGCACTTTCCC ACAATCAATTTTCAATTCCATCAAAAACCCATCTTTGCTTTTGTGTAATTCAATCATTAGAGCTTATTCTAGACATAACAAGTTCAAGGAAGCTATAAAC TTGTACCATAGGATGATGGAAAATGGGGTTGAACCAGACAAGTATACATTTACTTTTGTTTTAAAGGCTTGTAATGATTCTTTGGATTTTAATGAGGGTG TGAGAATTCACCATCATGTAGCTTCTAGGGAGTTAGAATGTGATGTGTTTATTGGGACTGGTCTTGTTCATATGTACTGTAAAATGGGTCACTGGGATAG TGCAAGAAAGGTGTTTGATAAAATTCCTGTGAAGGATATTGCTTCTTGGAATGCAATGATTTCAGGTACAATTCTAGTGGCGAAGCC BLAST |
Tissue | flowers |
Gene name | LI_gene_54104; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_192609
Blastp | Pentatricopeptide repeat-containing protein At2g39620 from Arabidopsis with 44.2% of identity |
---|---|
Blastx | Pentatricopeptide repeat-containing protein At2g39620 from Arabidopsis with 43.65% of identity |
Eggnog | Pentatricopeptide repeat-containing protein(ENOG410Z7Z7) |
Kegg | Link to kegg annotations (AT2G39620) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019452105.1) |
Pfam | Pentatricopeptide repeat domain (PF13812.5) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |