| Id Trinity | FTRINITY_DN55758_c3_g1_i13 |
|---|---|
| Name Transcript | Ll_transcript_191306 |
| Sequence | ACCAAACCCTCGCACGAACACAAACACAAGCATCCAGTTCAGGCAGTCACGAACCTCATCACCCTCTGGCCGTCAACCACACGCTATACTCACACTCGCC AGCAGTTATGACGGAACCACACCACAGCCACGACACCTTGCCTTCTTCTGTTGTCCAAACTAAGCAGAAGAAGCTTCGCAAGAGAAAAAGAGCTCGCAAG ACTGAACAGTTAAACCACCAATTGGAAGAACAAGAGAACAAAGATGGTGAAGAATCGTTGGAGGAAGAGAATGATGCAAATATGAGTGGTGGGGATGTTA GAGAAGAACAGAATTTAGAAGATGGTGATGGTAATAATAATGAGGGTGAGGAAGGGGGAGAGAACGTTGCCTCTGGGATTATGAGTGTGGAGTCTTTTGA GTCTCTGGGATTGTCTGAACCAACTTATAAGGCTGTTATGGATATGGGTTTCCATCACATGACTCAGATTCAAGCAAGATCAATTCCACCACTTCTGATT GGAAAAGATGTTCTCGGTGCTGCAAGGACAGGGGCTGGAAAAACTCTTGCCTTTTTAATTCCAGCTGTGGAATTGCTGCACGGCATCCAGTTTACACCTC GAAGTGGTACTGGTGTTGTTGTAATATGCCCGACTAGAGAGCTCGCAATTCAGACACATGCTGTAGCAAAGGAACTACTCCGATATCATTCACAAACACT TGGATTGGTTATTGGGGGTGCAGGTAGAAAGGGGGAAGCTGAACGAATTGTTAAAGGGGTAAATCTGTTGGTAGCAACGCCTGGGCGTCTTCTCGATCAC CTTCAAAATACAAAGGGATTCATATATAAAAACTTGAAGTGCCTCATAATTGATGAAGCTGACAGGATATTGGAAGCAAATTTTGAGGAGGAAATGAAGC AGATCATTAACATACTTCCAAAGAGCAGGCAAACAGCTCTGTTTTCAGCCACACAAACGAAGAAGGTTAAGGATCTTGCTCGCTTGTCGTTTCAGACACC TCCTATCTACATTGATGTGGATAATGGGAGAACAAAGGTCACAAATGAAGGATTGCAGCAGGGCTATGTTGTTGTTTCCTGTGCCAAGCGTTTTGTTGTT CTCTATTCATTCTTGAGGAGATACCAGTCCAAAAAAGTGATGGTCTTTTTCTCTTCATGCAACTCTGTCAAATTCCATGCAGACCTTCTGAAGTGCACTG GGTTGGATTGCTTAAATATCCATGGAAAACAAAAGCAGCATGCCCGGACAACAACCTTCTTTAATTTCTGCAAAGCAGAAAAGGGAATCTTGCTCTGTAC TGATGTTGCTGCTCGCGGACTTGACATACCTGATGTGGACTGGATTGTGCAGTATGATCCACCTGATGAACCGAAGGAATATATTCATCGGGTTGGTAGA ACAGCTCGTGGGGAAGGTGGAAAAGGAAATGCTTTGCTTTTTCTGATTCCAGAAGAAGTGCAATTTCTTCGCTATTTGAAGGCAGCAAAGGTCCCTGTGA AAGAGTATGCATTTGAAGAAAAGAAGCTTGCAAATGTGCAGTCGCACCTGGAGAAGTTGGTGGCTGGTATTTATCACTTGAACAATATGGCTAAAGAAGC TTATAGATCATACTTATTGGCATACAATTCACACTCTATGAAGGATATATTCAACGTTCACCGCCTTGATTTACTGGCTGTTGCTGCTTCATTCTGTTTT TCAAACCCACCAAATGTGAGTGTGAACATAAACAGCAGTAATCAAAGGAACAAAATGCGTAAAGTTGATGGAAGTAGACATGGATTCAGTGACAACAATC CTTATGGAAAGAGAAATGCTGATGATAATCGCCAATTTGTGAGGCATTAGGAGCAGCTTTGTACACTGGGGAGTTATTTCCCACAAAAGGTTTTAGTAGG ACAAACAATTTTATAGCCGGATGAAATTTTTGTAACTTAGTCAAATTATTCATACCACATTAAGTTATTCAATGTATCAGAAAATATTGTTTTTTTTATC TTTATTGTCATGTGGTGATATCAATCTTTCATTTGAAGATTCTAAGTATTCTTAAGCCTGTCGCACGCATTGAATATCTCTCTCTAGATTCAGA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_54197; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_191306
| Blastp | DEAD-box ATP-dependent RNA helicase 27 from Oryza sativa with 68.17% of identity |
|---|---|
| Blastx | DEAD-box ATP-dependent RNA helicase 27 from Oryza sativa with 67.86% of identity |
| Eggnog | purine NTP-dependent helicase activity(COG0513) |
| Kegg | Link to kegg annotations (4334469) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019437092.1) |
| Pfam | DEAD/DEAH box helicase (PF00270.28) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |