Ll_transcript_191292

• Id Trinity: FTRINITY_DN55758_c3_g1_i2
• Name Transcript: Ll_transcript_191292
• Sequence: ACCAAACCCTCGCACGAACACAAACACAAGCATCCAGTTCAGGCAGTCACGAACCTCATCACCCTCTGGCCGTCAACCACACGCTATACTCACACTCGCC AGCAGTTATGACGGAACCACACCACAGCCACGACACCTTGCCTTCTTCTGTTGTCCAAACTAAGCAGAAGAAGCTTCGCAAGAGAAAAAGAGCTCGCAAG ACTGAACAGTTAAACCACCAATTGGAAGAACAAGAGAACAAAGATGGTGAAGAATCGTTGGAGGAAGAGAATGATGCAAATATGAGTGGTGGGGATGTTA GAGAAGAACAGAATTTAGAAGATGGTGATGGTAATAATAATGAGGGTGAGGAAGGGGGAGAGAACGTTGCCTCTGGGATTATGAGTGTGGAGTCTTTTGA GTCTCTGGGATTGTCTGAACCAACTTATAAGGCTGTTATGGATATGGGTTTCCATCACATGACTCAGATTCAAGCAAGATCAATTCCACCACTTCTGATT GGAAAAGATGTTCTCGGTGCTGCAAGGACAGGGGCTGGAAAAACTCTTGCCTTTTTAATTCCAGCTGTGGAATTGCTGCACGGCATCCAGTTTACACCTC GAAGTGGTACTGGTGTTGTTGTAATATGCCCGACTAGAGAGCTCGCAATTCAGACACATGCTGTAGCAAAGGAACTACTCCGATATCATTCACAAACACT TGGATTGGTTATTGGGGGTGCAGGTAGAAAGGGGGAAGCTGAACGAATTGTTAAAGGGGTAAATCTGTTGGTAGCAACGCCTGGGCGTCTTCTCGATCAC CTTCAAAATACAAAGGGATTCATATATAAAAACTTGAAGTGCCTCATAATTGATGAAGCTGACAGGATATTGGAAGCAAATTTTGAGGAGGAAATGAAGC AGATCATTAACATACTTCCAAAGAGCAGGCAAACAGCTCTGTTTTCAGCCACACAAACGAAGAAGGTTAAGGATCTTGCTCGCTTGTCGTTTCAGACACC TCCTATCTACATTGATGTGGATAATGGGAGAACAAAGGTCACAAATGAAGGATTGCAGCAGGGCTATGTTGTTGTTTCCTGTGCCAAGCGTTTTGTTGTT CTCTATTCATTCTTGAGGAGATACCAGTCCAAAAAAGTGATGGTCTTTTTCTCTTCATGCAACTCTGTCAAATTCCATGCAGACCTTCTGAAGTGCACTG GGTTGGATTGCTTAAATATCCATGGAAAACAAAAGCAGCATGCCCGGACAACAACCTTCTTTAATTTCTGCAAAGCAGAAAAGGGAATCTTGCTCTGTAC TGATGTTGCTGCTCGCGGACTTGACATACCTGATGTGGACTGGATTGTGCAGTATGATCCACCTGATGAACCGAAGGAATATATTCATCGGGTTGGTAGA ACAGCTCGTGGGGAAGGTGGAAAAGGAAATGCTTTGCTTTTTCTGATTCCAGAAGAAGTGCAATTTCTTCGCTATTTGAAGGCAGCAAAGGTCCCTGTGA AAGAGTATGCATTTGAAGAAAAGAAGCTTGCAAATGTGCAGTCGCACCTGGAGAAGTTGGTGGCTGGTATTTATCACTTGAACAATATGGCTAAAGAAGC TTATAGATCATACTTATTGGCATACAATTCACACTCTATGAAGGATATATTCAACGTTCACCGCCTTGATTTACTGGCTGTTGCTGCTTCATTCTGTTTT TCAAACCCGCCAAAGGTGAATCTGAACATAGACAGTAGTGCTTCGAAGCATAAGAAGAAAATGCGTAAGGTAGAAGGAAGCAAGCACGAGCTTCCGTGAC AAGAATATGTATGCGAAGAGAAATGCCGATGATCAGTGACAGTTAGCGGGGACTTGTCAAGGCTGTGTCGTGGATTTGATTCCGGTCATGCCCTTCACAT CTCAGAGAAAGTTTTGGTAGGAACACTTATTTTATATGATAAGATTGGATTCATTAGTTATAGATAAAAAACACATTATTAGAGTAATTGGAGTGTTTTC TTCAACAGAAATGTGTTTATGTATTCTTCAACTGTAATATTCAGCAGGATTACTGGTGCCCCATCCCATGTTTCCAGTTTATAAGTTCTATCATCACTTT TCAGAAGCAGTTTATAAGTTCTATCACATAATTTTGTCAATTAATTTATAATCATGCAATTTTTCTTGAAGAATTCAATACTTTATTGTTTATTATATTT AATAAATGGTTTCAAT
• Tissue: flowers
• Gene name: LI_gene_54197;
• Additional information: details;

Expression of Ll_transcript_191292

FPKM

• FPAB: 17.4
• FPNAB: 22.7
• LF1: 11.7
• LF2: 9.6
• LF3: 13.5
• LF4: 19.4
• UF1: 10.6
• UF2: 9.8
• UF3: 17
• UF4: 18.1

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_191292

• Blastp: DEAD-box ATP-dependent RNA helicase 27 from Oryza sativa with 69.34% of identity
• Blastx: DEAD-box ATP-dependent RNA helicase 27 from Oryza sativa with 69.67% of identity
• Eggnog: purine NTP-dependent helicase activity(COG0513)
• Kegg: Link to kegg annotations (4334469)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019437092.1)
• Pfam: DEAD/DEAH box helicase (PF00270.28)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;