Ll_transcript_191294

• Id Trinity: FTRINITY_DN55758_c3_g1_i4
• Name Transcript: Ll_transcript_191294
• Sequence: CTTTGATCCATCTCATTCTCACATCGGAACTATTATAGGGTTTAACGAGGTCGAGAAGAAGAAGAAGCAGAAGCAGAAAGTAGAAGCAGTGATCATGGCA GAAGAATCAGAAAACAACCTTCATCTTTCTCCTATCGACGGAACAAAAAAGAAGAAGAAGAATAAGAAAAATGATAAGAAAAATAGTAAGAAAAGACCTC GTGAAACTGAAACCGACGAGGAATCACCGCAAGCGGAGGAAACTGTAGAATCAATGGAGAACGAGAAGGTCGAAGAAGTTGAAGTGAAAATCGAGAAGAA AAAGAAGAAGAGTGGTTCTGGAATTATGAGTACAGAAGCATTTGCATCACTGGGATTATCTGAAGCAACATATAAAGCAATTAATGATATGGGTTTCGAG AATATGACTCAGATTCAAGCGAGATCGATTCCACCGCTTTTGATTGGTAAAGATGTTCTTGGTGCTGCTAGGACTGGTTCTGGTAAAACCCTAGCTTTTC TTATTCCTGCGGTTGAACTCTTGTACAATGTCCAATTTACCCCTCGTAATGGAGCTGGTGTTATTGTTATTTGTCCCACTAGAGAGCTTGCAATTCAGAC GCATGCCGTAGCGAAGGAGCTACTGAAGTATCATTCACAAACACTTGCTTTGGTTATTGGAGGGGCAACTAGAAAAATTGAAGCGGAACGTCTTGCTAAA GGGGTCAATTTATTGGTAGGAACTCCTGGTCGTCTTCTTGATCATCTTCAAAATACAAAGGGATTCATGTATAAAAACTTGAAGTGCCTTATGATTGATG AAGCTGACAGGATACTGGAAGCAAACTTTGAGGAGGAAATGAAGCAGATTATTAAGATCCTTCCAAAGGATAGGCAAACAGCTTTATTTTCAGCTACACA AACAAAAAAGGTTGAGGATCTTGCCCGGTTGTCATTTCAGACGACTCCTATCTATATTGATGTTGATGATGGGAGAACCAAGGTTACAAATGAAGGATTG CTGCAGGGATATGTTGTTGTTCCATGTGCCAAGCGATTCATTGTTCTCTATTCTTTCTTGAAGAGACACAAGTCAAAAAAAGTGATGGTCTTTTTCTCTT CATGCAACTCTGTGAAATTCCATGCGGACCTTCTTAATCTCATTCAGTTGAATTGCTTAAGTATTCATGGGAAACAAAAGCAGCAGAGCCGGACAACTAC CTTCTTTGACTTCTGCAAAGCAGAAAGTGGGATATTGCTCTGTACTGATGTTGCTGCTCGTGGGCTTGATATACCGGCTGTGGACTGGATTGTACAGTAT GATCCGCCTGATGAACCAAAGGAATATATCCATAGGGTTGGTAGAACAGCTCGTGGGGAAGGGGGGAAAGGAAATGCTTTGCTTTTCCTGATCCCTGAAG AACTGCAATTTCTTCGCTATCTGAAGGCAGCTAAGGTCCCTGTGAAAGAGTATGCATATGATGAATCAAAGGTGGCCAATGTACAGTCTCACCTGGAGAA TTTGGTAGCTAACAATTTTTACTTGAACAAGATGGCTAAAGAAGCTTATAGATCATATATATTAGCTTACAATTCACATTCTATGAAGGACATATTCAAT GTTCACCGCCTTGATATGCCGGCCATTGCTGCTTCATTCTGTTTTTCAAACCCACCAAATGTGAGTGTGAACATAAACAGCAGTAATCAAAGGAACAAAA TGCGTAAAGTTGATGGAAGTAGACATGGATTCAGTGACAACAATCCTTATGGAAAGAGAAATGCTGATGATAATCGCCAATTTGTGAGGCATTAGGAGCA GCTTTGTACACTGGGGAGTTATTTCCCACAAAAGGTTTTAGTAGGACAAACAATTTTATAGCCGGATGAAATTTTTGTAACTTAGTCAAATTATTCATAC CACATTAAGTTATTCAATGTATCAGAAAATATTGTTTTTTTTATCTTTATTGTCATGTGGTGATATCAATCTTTCATTTGAAGATTCTAAGTATTCTTAA GCCTGTCGCACGCATTGAATATCTCTCTCTAGATTCAGA
• Tissue: flowers
• Gene name: LI_gene_54197;
• Additional information: details;

Expression of Ll_transcript_191294

FPKM

• FPAB: 10.7
• FPNAB: 23
• LF1: 11.5
• LF2: 11.7
• LF3: 13.5
• LF4: 19.2
• UF1: 11.3
• UF2: 10.7
• UF3: 15.2
• UF4: 16.1

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_191294

• Blastp: DEAD-box ATP-dependent RNA helicase 27 from Oryza sativa with 67.79% of identity
• Blastx: DEAD-box ATP-dependent RNA helicase 27 from Oryza sativa with 67.47% of identity
• Eggnog: purine NTP-dependent helicase activity(COG0513)
• Kegg: Link to kegg annotations (4334469)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019439296.1)
• Pfam: DEAD/DEAH box helicase (PF00270.28)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;