Ll_transcript_193632

• Id Trinity: FTRINITY_DN55783_c0_g1_i12
• Name Transcript: Ll_transcript_193632
• Sequence: CTTTAAATATGACAATTGTCTTTGTCTTCTGTGTCACAGAAGAAAACTGAAACCGGCACTCAGATTTATAGTCATAGTCAAACTATGAAGCACTATTCAA AACTCAAAAACTTCCATGTTATTGGGGTTATCTCTGCAATTCTATTATTGGTATCATTAAGAGTCAAAGTAGCATCATGTGATGAGTACCCTGCTATGCA TTGCAGAAAACACAGTGCATTTTTGACTGATTTTGGTGGGGTTGGTGATGGCAAAACATGCAACACCAAGGCCTTTCAATATGCTATTAGCAATCTCAGC CAATATGCATGTGATGGGGGAGCACTACTTGTTGTTCCACCTGGGAAATGGTTAACAGGAAGCTTCAATCTAACTAGCCATTTCACCCTTTTTCTTCAAA AAGATGCTGTTATTCTTGCTTCTCAGGATGAATCAGAATGGCCTCATCTTCCTGTCCTACCATCATATGGCAGAGGAAGAGATGCTCCTGGTGGAAGGTT TAGTAGTCTCATTTTTGGAACTAACCTCACTGATGTTATAATTACGGGCTACAATGGAACAATTGATGGACAAGGATCTTATTGGTGGGACAAGTTCCAC AGAGGTGAATTGAATCTCACGAGGCCATACTTGATTGAGATTATGTTCTCAGATCATATCCAGATATCAAATCTTACTTTGATCAATTCTCCATCTTGGT TTGTCCATCCAATTTACAGCAGCGACATTATAATTCAAGGGCTAACCATTTTTGCGCCAGTTGACTCTCCCAACACAGATGGCATAGATCCTGATTCTTG TAACAATACTAGGATTGAAGATTGTTACATTGTCTCCGGTGACGATTGTGTCGCAATTAAAAGTGGTTGGGATGAGTATGGAATCAAATTTGGAATGCCA AGCCAACACATCATCATTAGAAGGCTAACATGTATATCCCCTGATAGTGCTATGATTGCTTTAGGGAGTGAAATGTCGGGTGGAATCGAAGATGTTCGAG TTGAAAACATCACAGCTCTCAATACTCAATCAGCAGTTAGGATCAAAACTGGAGCTGGTAGAGGGGGTTATGTTAAAGACATATTTGTTAAAGGAATGAG CTTGAACAAAATGAAGTATGTGTTTTGGATGACCGGTTCGTATGGATCACACCCGGATACTGGCTTTGATCCCAAGGCACTTCCTAACATTACTGCGATA AATTATAGAGATGTGAGGGCTGATCATTGCAAATATTCAGCAAGACTTGAAGGAATTCCTAATGATCCTTTTACAGGTATATGCATTTCTAATGTAACTA TCACAGGTGGTAAAAAGAAATTGCAATGGAATTGCACTCATGTTGGAGGGGTTACAAGTAATGTACTTCCTAAGCCTTGTAAATTGCTTCCAGAGAAGAA AAGGACATTTGATTGTCCTTTCCCAGAGGACAAATTGCCCATTGAAAATGTTCAGTTGAAGACTTGTTGCTTTTAAACAAATTATTCTTCTATAAGAATG AGTGTATTTTAATTTTGAGTCTAACCTAGTAGCAACACCATTATTCTTTATGTGAAATTTTTAAAAAGGAAATGAATTCTACTACAAGTTATAGACTATA TGCTTTGTTTGTCTTGTTAGTGAATGATGTTGGGATTGTTATGTCTAATATTTTAACCATAGCATGCTACTTACCCCACAATGGATGATAATAATAGGTT CCCAAGTCATGTCTACATCTGTAGATTCTTGAATTGCACTAGATCATGCAAGAATTATAATGCCAAATTTCATCACTCTATCACTAAATGGGTCATTATT CATCACACTTTTCCTTTAATCTGTCATTAGAAAAATATTACTTTTTTCAGAAATCATTACATTA
• Tissue: flowers
• Gene name: LI_gene_54411;
• Additional information: details;

Expression of Ll_transcript_193632

FPKM

• FPAB: 51.8
• FPNAB: 3.5
• LF1: 3.1
• LF2: 1.6
• LF3: 1.7
• LF4: 3
• UF1: 3.7
• UF2: 3.2
• UF3: 1.8
• UF4: 2.6

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_193632

• Blastp: Probable polygalacturonase from Vitis with 67.05% of identity
• Blastx: Probable polygalacturonase from Vitis with 65.99% of identity
• Eggnog: Glycoside hydrolase family 28(COG5434)
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019450638.1)
• Pfam: Pectate lyase superfamily protein (PF12708.6)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;