Ll_transcript_193645

• Id Trinity: FTRINITY_DN55783_c1_g4_i5
• Name Transcript: Ll_transcript_193645
• Sequence: CTGAGGAAGCATTGAAGCAACTTTCCAGTGACGCTCTCATCTCATCAAACCTATCATCATATCTCAACTACTTCCCTTTCACTTCACTCCTCTTTCTATT TCCCAAACAGATCTTCACTTCATTCATTGTTACCACTTCTCACGCCATTCCCATTTTTCCATCGACCCACATCATCATCTGCTAAATCAAACCCCATTTC TCAAAAGGGTATCTTTTTCATTCTCTAATGATGGTGGATACCTCAACTATTGGGCGGTTCCACCACCAAAAACTCGAATTTAAGCGATGGGTTCCAATAT TATTAACCTCCTACAAGACCCTTTTCACGGTTCTATGGATCGCTGCATTCGCCTCGATTTTCGTGTGGCAGAGGAACATAGTCGGTGGTTTCTTAGTGTT CGGTCGTGCCACGGCGGCGAGGCCAATACCGAAGCTGAGACCGGTGGCTTTCAATTTGACGGATTTCGGAGGGGTTGGTGATGGGGTTACTCTAAATACT GAAGCATTTGAGAGGGCAATTTCGGCAATATCTAAATTAGGGAAGAAAGGTGGTGGCCAGCTTAATGTTCCTCCGGGACGGTGGCTTACGGCGCCGTTTA ATCTTACCAGTCATATGACTCTATTTCTAGCTGAAGATGCTGTTATACTTGGACTTGATGATGAAAAGTATTGGCCACTAATGCCTCCATTGCCTTCATA TGGGTATGGGAGGGAGCATCCTGGGCCTCGATACGGCAGTTTGATTCATGGTCAAAATCTTAAAGATATTGTGATAACAGGGCATAACGGCACCATAAAT GGACAGGGACAAGCGTGGTGGAAAAAATATCGCCAGAAGCGTCTCAACCACACAAGGGGGCCACTTGTTCAGATCATGTGGTCTAGTGACATTGTGATCA CTAATATTACACTGCGTGACTCTCCCTTTTGGACACTTCATCCATATGACTGCAAGAACATTACAATAAAACATGTTACAATACTGGCTCCTGTATTCGA AGCTCCAAATACTGATGGCATAGATCCTGACTCTTGTGAGGATATGTTGATAGAGGATTGTTACATAAGTACGGGAGATGATGCAATTGCGATAAAAAGT GGCTGGGATCAGTATGGAATTGCTTATGGAAGGCCTTCCAAGAATATAATGATCCGAAACCTTGTTGTTCGCTCCATGGTCAGTGCTGGCGTGTCAATAG GCAGTGAGATGTCTGGTGGGGTATTCAATGTCACTGTGGAGAATCTTCTTGTATGGGACTCTAGACGCGCAGTGAGGATTAAGACTGCTCCTGGGCGTGG TGGATATGTGCGTCAAATAACTTACCGGAATCTAACATTTGAGAATGTTCGTGTTGGAATTGTCATGAAGACAGATTACAATGAACACCCTGATAATGGG TATGACCCTACAGCACTTCCAATACTGAAAGACATAAGCTTCACTTCCGTCCATGGCCAGGGAGTCCGTGTGCCGGTACGTATTCATGGTAGTGAAGAGA TTCCAGTGAGGAATGTGACTTTTCAGGATATGTCAGTTGGGCTAACCTACAAGAAGAAACATATCTTTCAGTGTGCGTTTGTTCAAGGCCGCGTAATAGG GACCATCTTTCCTGCTCCCTGTGTGAACCTTGATCGTTACAACGAGCAAGGACAGCTTGTCGAGCATTCTGCATTGCAGAATGTAACGGATATAGATTAT GATTTTTGAGATATGTTCTTCTATTATTCAGGCCTCAGTTAATGTCTCTATCTGTAATAGATTATTTTTTGTGGGGGTTGGATCATTCAACTCATTCTTT CTTTGTAATTTCATTTTCTTACTCCATTCCATAGCTTTCTTAAGTGGAATTGTATTGTATATAAGGAAAACTTTCAGTGCTTGCGGAAGTTTACTAGGTG AGAAATGGATTTTACTTAGATATCATTCTTCAGGATTTGTTGCAAGATAGTGCTCAAGTCTGAGGTTGGTTTTGTTAAAGGTGGTCCAATGCACGAGACT TTTTCTAGTAGAACATGAGAATGATGGATGTATGCAATCTACTTTAACAAAGGAACCATCTATGAACTCATGATAGTTTATAAAATTTCAC
• Tissue: flowers
• Gene name: LI_gene_54417;
• Additional information: details;

Expression of Ll_transcript_193645

FPKM

• FPAB: 5
• FPNAB: 10.3
• LF1: 7.8
• LF2: 7.7
• LF3: 5.4
• LF4: 5.8
• UF1: 7.7
• UF2: 7.5
• UF3: 5.6
• UF4: 5.3

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_193645

• Blastp: Probable polygalacturonase from Vitis with 46.63% of identity
• Blastx: Probable polygalacturonase from Vitis with 46.63% of identity
• Eggnog: Glycoside hydrolase family 28(COG5434)
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019455271.1)
• Pfam: Glycosyl hydrolases family 28 (PF00295.16)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;