Ll_transcript_193646

• Id Trinity: FTRINITY_DN55783_c1_g4_i6
• Name Transcript: Ll_transcript_193646
• Sequence: ATTTCTTAAGATATCAAAAGGGTGACACTTAGCTTCATCTAAATTTTTTTTTTTCTTATCATTTATTTCACTCACCATTTTGGTCCGTTATATCTGATGG ATGAGATTGCTATTGCGACCCCATCTCATGACCTTCTCACGAAACCCATCTTCTTCTTCATCATTATCATTTCTCACTGCTTCCCTTTCAATTCAGTCCT TCATTTTATTTTATTTACCAATCACCCCATTCCTTTCTCACTCTTCCCAATCTCTGAATCAAATACTCCACTCCCTCACTAATCCCATGTTTCAATCCAC CCACTTCTAAATCATACTCATTTTCAATTGATGATGGTGGATACTTCAAATCTTGGCCGATTCCATTACCAAAGACTCGACTTTAAGCGTTGGGTTCCAA TCTTATTAACTTCCCACAAGACCCTTTTCACCATTCTCTGGATCGCCGCATTTGCATCGGTTTTCGTGTGGCAGAGGAGCGTAGTCGGTGGTTTCTTAGT GTTTGGCCGTGTCGCGGTGGCGGCGAGGCCCATACCGAAGCTGAGACCGGTGGCTTTCAATTTGACGGATTTCGGAGGAGTGGGTGATGGGGTTACTCTG AACACTGAAGCATTTGAGAGGGCAATTTCGGCAATATCTAAATTAGGGAAGAAAGGTGGTGGCCAGATTAACGTGCCACCGGGTCGGTGGCTTACGGCGC CGTTTAATCTTACCAGTCATATGACTCTGTTCCTAGCTGAAGATGCTGTTATACTTGGACTTGATGATGAAAAATATTGGCCATTAATGCCTCCATTGCC TTCATATGGGTATGGTAGGGAACATCCCGGGCCTCGATATGGCAGTTTGATTCATGGTCAAAATCTTAAAGATATTGTGATAACAGGGCATAACGGTACC ATAAATGGACAGGGACAAGCATGGTGGAAAAAACATCGCCAGAAGCGTCTCAACCATACAAGGGGGCCACTTGTTCAGATCATGTGGTCTAGTGACATTG TGATCACTAATATTACTCTGCGTGACTCTCCTTTTTGGACACTTCATCCGTATGACTGCAAGAACATTACAATAAAACATGTTACGATACTGGCTCCTGT ATCCAAAGCTCCAAATACAGATGGCATAGATCCTGACTCTTGTGAGGATATGTTGATAGAGGATTGTTACATAAGTACGGGAGATGATGCAATTGCGATA AAAAGTGGCTGGGATCAATATGGAATTGCGTATGGAAGGCCTTCCAAGAATATAATGATCCGAAACCTTGTTGTTCGCTCCATGGTCAGTGCTGGCGTGT CAATAGGCAGTGAGATGTCTGGTGGGGTATTCAATGTCACGGTGGAGAACCTTCTTGTATGGGACTCTAGACGTGCGGTGAGGATTAAGACTGCTCCTGG ACGTGGTGGATATGTGCGCCAAATAACTTACCGGAATCTAACATTTGAAAATGTCCGTGTCGGAATTGTTATGAAGACAGATTATAATGAACACCCTGAT GATGGGTATGACCGTACAGCACTTCCTATACTCAAAGACATAAGCTTTATCACCGTCCATGGCCACGGAGTCCGTGTGCCAGTACGTATTCATGGCAGTG AAGAGATTCCTGTGAGAAATGTGACTTTTCAGGATATGTCAATTGGGCTAACCTACAAGAAGAAGCACATATTTCAGTGTGCCTTTGTTCAAGGCCGCGT AATCGGGGCCATTTTTCCTGCTCCCTGTGAGAACCTTGATCGATACAATGAGCAAGGACAGCTGGTCAAGCATTCTGCATCACATAATGTAACAGATATA GATTATGATTTTTGAGCTGTTCTATTAATCAGGCCTCAGTTTATGTCTGTATCTGTAATAGATCATTTTTTGTGAGGTTTGTATCAGTCTAGTCATACTT TCTTTGCCATTTCATTTCCTTAGTCTGTTTTATAGTTTTCTTTAAGTGGAGTTGTATTGTATATATGGAAAAATTTCAATTCTAACGCAAGTTTACTAGA TGACAGAAATATTTTATCTCAATGCTTTTACTATTGAAGATTTATGCAAGTAAGAGAATTACTGAAGTCACTGATTTTGTTACTTTATTAAATTCTCACC CCCACTTTTA
• Tissue: flowers
• Gene name: LI_gene_54417;
• Additional information: details;

Expression of Ll_transcript_193646

FPKM

• FPAB: 8.9
• FPNAB: 10.8
• LF1: 11
• LF2: 7.9
• LF3: 6.3
• LF4: 6.4
• UF1: 9.4
• UF2: 8.3
• UF3: 6.4
• UF4: 6.7

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_193646

• Blastp: Probable polygalacturonase from Vitis with 45.91% of identity
• Blastx: Probable polygalacturonase from Vitis with 45.91% of identity
• Eggnog: Glycoside hydrolase family 28(COG5434)
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019443391.1)
• Pfam: Glycosyl hydrolases family 28 (PF00295.16)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;