| Id Trinity | FTRINITY_DN55793_c2_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_192634 |
| Sequence | CGGATGATGGGCATAATCGTCCATAGATGAAGGGTATTTATTCTTCTCCTTCTTCATTGAATTCAATTGTTGTAGTTGTTTCAGCATTGATTGAAGTGTA GATGGCTGTTCCCATCGAAGAAGCCATTGCAGCTCTATCCACATTCTCTCTAGAGGATGATCAACCTGAAGTTCAAGGACCTGGAGTTTGGGTATCATCT CAAAGATCTGCAACTCAGAGTCCAATCGAGTATACTGATGTTGCTGCTTATCGATTATCGTTATCCGAGGATACTAAAGCTCTTAATCACCTTAATGCCC TTACTCATGACGGAAAAGAGATGGCGTCCGTGCTTTACACGTATCGTAGTTGTGTCAAAGCGCTTCCTCAGCTTCCGGATTCTATGAAGCAAAGCCAAGC TGACTTGTATTTGGAAACATATCAAGTTCTGGATTTGGAAATGAGTCGTTTGCGTGAAATTCAGCGATGGCAAGCATCAGCTTCCTCTAAATTAGCTGCT GACATGCAACGTTTTTCTAGGCCTGAGCGCCGCATTAATGGCCCAACTATTTCTCACTTATGGTCCATGTTGAAGTTACTTGATGTTTTGGTGCAACTCG ACCATCTTAAAAATGCTAAGGCAAGCATACCTAATGATTTCTCATGGTATAAAAGGACTTTCACACAAGTCAGTGGTCAGTGGCAAGACACCGATTCAAT GAGGGAGGAGTTAGATGATTTACAGATCTTCTTGAGCACAAGATGGGCTATTTTGCTGAATTTGCATGTTGAGATGTTCCGTGTGAACAATGTAGAAGAC ATTCTTCAAGCTCTTATAGTCTTTGCAGTCGAGTCTTTGGAGTTGGACTTTTCACTTCTCTTTCCAGAGCGTCATACTCTTTTGCGCCTTCTGCCTGTTC TTGTTGTCCTAGTGACATCATCAGATAAGGATAGCGAGTCTTTGTACAAGAGGGTGAAAGTCAACAGACTGATCAATATATTTAAGAATGATGCAGTCAT TCCTGCATTTCCAGATCTGCATCTGTCTCCTGCTGCAATTTTGAAGGAATTATCAACTTACTTCCCAAAGTTTTCTTCCCAAACACGGCTTCTCACCCTT CCAGCTCCTCATGAGCTCCCTTCTCGTGAGGCACAAGAGTATCAGAGGCATTATCTAATCGTCAACCATATTGGAGCGATACGTGCAGAGCATGATGATT TCACAATTCGTTATGCTTCAGCAATGAATCAGCTGTTATTGTTAAAGTCCACTGATGGTTCTGATGTTGATTGGAGCAAAGAAGTCAAGGGGAACATGTA TGATATGATTGTTGAAGGTTTTCAGCTATTAAGCAGATGGACCACGCGTGTCTGGGAACAATGTGCTTGGAAATTTTCACGTCCTTGCAAGGATGCTTCC CCATCATTCTCTGACTATGAAAAGGTGGTACGATATAATTACAGTGCAGAGGAAAGAAGAGCACTGGTTGAACTTATGAGCTACATAAAGAGTGTTGGGT CTATGATGCAGCGTTGTGATACACTGGTTGCTGATGCTTTATGGGAAACAATACATGCCGAGGTCCAAGATTTTGTCCAGAACACATTGGCTACTATGTT GCGGACTACCTTCAGAAAGAAGAAGGACCTCTCTAGGATTCTTTCTGATATGAGGACTCTTTCAGCTGATTGGATGGCTAACACAAGCAAGTCAGAATCT GAGTTACAGTCCTCACAGCATGGAGGTGAAGAAAGCAAAGCAAACATATTTTATCCAAGGGCAGTTGCCCCTACTGCTGCTCAGGTGCACTGCTTGCAGT TCTTAATATATGAGGTGGTTTCTGGCGGTAACCTTAGGAGGCCGGGTGGACTCTTTGGGAATAGTGGCTCAGAAATTCCAGTTAATGACTTAAAACAGCT GGAGACATTTTTTTACAAGCTTGGTTTTTTCCTTCATATTTTAGACTACTCAGTGACTGTAGCAACATTGACGGATCTTGGTTTCCTATGGTTCAGAGAA TTTTACTTGGAGTCTTCGCGTGTCATTCAGTTTCCAATTGAGTGCTCTCTTCCCTGGATGTTGGTGGAATGTGTACTTGAGTCACCAAAGTCTGGTCTTC TTGAGAGTGTCCTGATGCCATTTGACATCTATAATGACTCAGCTCAGCAAGCTTTGGTGTTGCTGAAGCAACGGTTTCTGTATGATGAAATTGAGGCTGA GGTGGATCATTGTTTTGATATATTTGTTTCAAAATTGTGTGAAACTATTTTCACATATTACAAAAGTTGGGCAGCAAGTGAATTGCTTGACCCGTCTTTC CTCTTTGCCTCAGACGATGCAGAAAAGTATGCTGTGCAGCCTATGAGGTTCAATATGCTGCTAAAAATGACTAGAGTGAAGCTACTTGGAAGGATGATTA ATTTGCGAAGTTTGATCACTGAAAGGATGAACAAAGTTTTCCGCGAAAATATTGAGTTTCTGTTTGATCGTTTTGAGTGTCAGGATCTGTGTGCCATAGT GGAATTAGATAAGTTGTTGGGTGTTTTAAGACATTCTCATGAACTAATATCGAGAGATCTTTCCGTAGACTCTTTTAGTCTCATGTTGAATGAGATGCAA GAGAATATCTCTCTTGTGTCATTTTCTAGTCGACTGGCCTCACAGATTTGGTCTGAGATGCAAGGTGACTTTTTGCCAAATTTCATCCTCTGCAATACTA CACAACGTTTTATCAGATCATCAAAGGCTGTTCCTGTTCAAAAACCCTCCATACCCTCTGCTAAGGCTAGTTTCTATTGTGGTACTCAAGATTTGACTTC AGCGCATCAAAGTTTTGCACGATTGCATAGTGGGTTCTTTGGATTACCTCACATGTTTTCTATTGTTCGAATTTTGGGATCCCGGTCATTGCCTTGGCTT ATTAGAGCCCTCCTTGATCACATATCTAACAAGATAACTTCACTTGAGCCAATGATCACAGGATTACAAGAATCCCTTCCAAAATCAATAGGACTTCTGC CTTTTGATGGAGGTGTGACAGGTACTTGGTAATGTTTAGTTTTTCTTTCACATTATTTTTTAAAACCTGTACTCTGAAAATATACTTCTACGTGTAAGTT TAAAATGTAAAGGCTCTAAAATGTGTTCTTTACATGTCTTGTTGGAAAATTATACTTCCTAGATCATTACTTATAGAAGATTCTTAAAATTTTCTATCCA TAGAATAGTGAAAGATAAGTTCCTTAATGAAATAATAGATTGTTTTATTGCGAAAGTCATGTTAATGGTTGTATATGCATCTGTTCTACCTTTTTCCAAA TTCTAGGATCATATGTTGTAAATAGTGGCTGACGTAAGACATTTAAGTTAACTATTTGTATCTTATATTTATTTGTCCATCTTTCTTTAGTAAAAAAAGT ATTATGGTTCATATGTATTGATCTACATTTTGTTTTCTTAATTTTGAAATCATTGTGTACGGGCAAATGGACAATGTTCAAACTATCGAACGCTTCGCAA GAAAATTGTGAAAACTTTCACACTTTTAGTCTTCACAGTTGTGTGAGACTTGTTAAAGAACATCTTAACTGGGAGACAAAGTCGGAGCTGAAATCTGAAG TTCTTCATGGCATAAAAGAGATTGGAAGTGTATTGTATTGGATGGGGCTTCTAGATATCGTGATGAGAGAAACTGATACTATGAGTTTCATGCAAACTGC TCCCTGGTTGGGCTTTCTTCCTGGAGCAGATGGGCAAATATTAACTTCTCCAGATGGTGGAGACAGCCCTGTTGTCAGCCTCTTTAAATCAACAGCTGCT GCAATGCTTTCATACCCTGGCTGCCCGTCTCCTACATCTTTTCAAATCATGTCAAAACAAGCAGAAGCTGCAGATCTTTTATATAAGGCAAACTTGAATA CTGGAAGTGTGCTGGAGTACGCACTTGCATTCACAAGTGCTGCATTAGATAAATATTGTAGTAAATGGAGTGCTGCGCCCAAGACGGGCTTCATTGACAT TACAATTTCTAAAGATTTCTATCGAATATATAGTGGCCTCCAAATTGGGTACTTGGAAGAGTCTGCACAAGTAGCATCAAACAGTCATGAAAGGCTGGGA GATTCAGTGGCTTGGGGAGCCTGCACCATAATTTATTTGCTTGGCCAACAGTTCCATTTTGAGCTCTTTGACTTTTCATATCAAATCCTCAATATCGCCG AAGTGGAGGCTGCATCTTCCGTTCAAACACACAAGAACTCAAACTTTGCTGTTCAGGGATGGGAAACCTTATTGGAAGGGATGAAAAAAGCAAGGAGATT AAATAACCATGTGTTCTCTATGCTTAAAGCGCGATGCCCCCTCGAAGAAAAGACAGCATGCGCTATTAAGCAAAGTGGTGCTCCGCTGCATCGTATCAAG TTTGACAACACGGTTTCAGCATTTGAGACACTGCCGCAGAAAGGTTCTTAAATGTGTCAATCTACTTATATGCTTATATGCGCCTATATGCTTATGCTCC TTAACAACTTTGCCTCTCATAAAGTAATGTTTGACATAAATGTTGACACTGTCTGGTGTGTGGTTTGTCCTCTTTGTGGTGTATATGTAACATTGTTATT GTTGTTGTTGTTATGAAATGTGAAGAGTGAATATGTTACATTGTAGTCAGGTAATGTTTCATGAGCAATGTCGAAAAGAGATATAATATTATTATGTCTG TCCTTCGGAAATGTGGAAAGTAGAACAATCG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_54493; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_192634
| Blastp | Protein PIR from Arabidopsis with 84.69% of identity |
|---|---|
| Blastx | Protein PIR from Arabidopsis with 84.69% of identity |
| Eggnog | cytoplasmic FMR1 interacting protein(ENOG410XPKW) |
| Kegg | Link to kegg annotations (AT5G18410) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019418762.1) |
| Pfam | Protein of unknown function (DUF1394) (PF07159.11) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |