| Id Trinity | FTRINITY_DN55793_c2_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_192636 |
| Sequence | CGGATGATGGGCATAATCGTCCATAGATGAAGGGTATTTATTCTTCTCCTTCTTCATTGAATTCAATTGTTGTAGTTGTTTCAGCATTGATTGAAGTGTA GATGGCTGTTCCCATCGAAGAAGCCATTGCAGCTCTATCCACATTCTCTCTAGAGGATGATCAACCTGAAGTTCAAGGACCTGGAGTTTGGGTATCATCT CAAAGATCTGCAACTCAGAGTCCAATCGAGTATACTGATGTTGCTGCTTATCGATTATCGTTATCCGAGGATACTAAAGCTCTTAATCACCTTAATGCCC TTACTCATGACGGAAAAGAGATGGCGTCCGTGCTTTACACGTATCGTAGTTGTGTCAAAGCGCTTCCTCAGCTTCCGGATTCTATGAAGCAAAGCCAAGC TGACTTGTATTTGGAAACATATCAAGTTCTGGATTTGGAAATGAGTCGTTTGCGTGAAATTCAGCGATGGCAAGCATCAGCTTCCTCTAAATTAGCTGCT GACATGCAACGTTTTTCTAGGCCTGAGCGCCGCATTAATGGCCCAACTATTTCTCACTTATGGTCCATGTTGAAGTTACTTGATGTTTTGGTGCAACTCG ACCATCTTAAAAATGCTAAGGCAAGCATACCTAATGATTTCTCATGGTATAAAAGGACTTTCACACAAGTCAGTGGTCAGTGGCAAGACACCGATTCAAT GAGGGAGGAGTTAGATGATTTACAGATCTTCTTGAGCACAAGATGGGCTATTTTGCTGAATTTGCATGTTGAGATGTTCCGTGTGAACAATGTAGAAGAC ATTCTTCAAGCTCTTATAGTCTTTGCAGTCGAGTCTTTGGAGTTGGACTTTTCACTTCTCTTTCCAGAGCGTCATACTCTTTTGCGCCTTCTGCCTGTTC TTGTTGTCCTAGTGACATCATCAGATAAGGATAGCGAGTCTTTGTACAAGAGGGTGAAAGTCAACAGACTGATCAATATATTTAAGAATGATGCAGTCAT TCCTGCATTTCCAGATCTGCATCTGTCTCCTGCTGCAATTTTGAAGGAATTATCAACTTACTTCCCAAAGTTTTCTTCCCAAACACGGCTTCTCACCCTT CCAGCTCCTCATGAGCTCCCTTCTCGTGAGGCACAAGAATATCCTCCAAAGTTTCTTATGTTTTAATTGATAATTTGATGCTGATCTGTTATTATTGAGT AAATGTTCCATTTCCTTGACCTGTCCTCTATCAAGAAATTGACTTTTTTTTTCATGTCTTTGAAGCTTACTATTAATCACATACACTGCAAATAGATGCA ATGTGACTGGCATCTAAAAAAGTATGGCCCAGTACACGAGGCTCCCACCTAGTGGGGTCTTGGTAGAGTAGATCAATAGATGTATGCAATTGTAAAAGAT TGAAAAAACAATACTAAAACAGAAAGATAGAAAGATAGGAAATAGAATCAGTAACTTTTCTGATTCTCATTGAATGTAATTGAATGAATCCTGAATACAA AGATATATCCCTATTTATAACAAGGGAAAACAGAAAAGAGGATAACTGAATCAGTAGCTGAATTATTCAGTTACTGAAAACAGAATCCAAACAGAAAACT GAATCCTACCCTAAACAGAAAACTATTCAGATAAGCATTATTGAAACACAGTTTCATTTTAATGCTTGATCTCTAATAGCAATCTTACTCACGCAAGTAA AGAGAATGTTTTCAGGATTTGAACTCGTGACCGCCAGGCCACAAGGCAAACAACCTTACCGTGCCAAGAGTACTCTGTAGTTTAGGATATTGAATTGCAT ATTTTCTGTTCATTGAAGGCAAACAACCCAAGGAGGATACTTTGGTTCTTTCCATTTATGATCATTCATCATTAAAAAGTTTAGGGGAAATTATATCGAC CTCTATTGAGGTTTGACTTAATTACATTTGACATCCTTCATGTTTCAGAAATTGCCGGACTTCCTTGAGGTTCGTGTTGTAATTACACTTACACCCTTGA GGTTTATATTGTCATTACATATCCTCCTAGACGCTTGCATTGTCATTACAAGCACACACCCTTTACAAAATAAATCTTAATGGAGGTCTGTACAATTTCT AAAACAAGATGGGTGTAAGTGTCTTCTTGCTATCTCTTTAGAATGTAGCCTTGACATGAAACACGTATCAGAGGCATTATCTAATCGTCAACCATATTGG AGCGATACGTGCAGAGCATGATGATTTCACAATTCGTTATGCTTCAGCAATGAATCAGGTGCTGCCTCTCTTCTCCCTCTTAGCTGGAAAGGAAAAGCCC TCCCTGACATCTTGCACATTTTGTTTCTGTTAACTGTTGCGTAGAGTTTAATGCCTGCTAGTGTGCTCTTTATCGTTTTCTCCAGCTGTTATTGTTAAAG TCCACTGATGGTTCTGATGTTGATTGGAGCAAAGAAGTCAAGGGGAACATGTATGATATGATTGTTGAAGGTTTTCAGCTATTAAGCAGATGGACCACGC GTGTCTGGGAACAATGTGCTTGGAAATTTTCACGTCCTTGCAAGGATGCTTCCCCATCATTCTCTGACTATGAAAAGGTGGTACGATATAATTACAGTGC AGAGGAAAGAAGAGCACTGGTTGAACTTATGAGCTACATAAAGAGTGTTGGGTCTATGATGCAGCGTTGTGATACACTGGTTGCTGATGCTTTATGGGAA ACAATACATGCCGAGGTCCAAGATTTTGTCCAGAACACATTGGCTACTATGTTGCGGACTACCTTCAGAAAGAAGAAGGACCTCTCTAGGATTCTTTCTG ATATGAGGACTCTTTCAGCTGATTGGATGGCTAACACAAGCAAGTCAGAATCTGAGTTACAGTCCTCACAGCATGGAGGTGAAGAAAGCAAAGCAAACAT ATTTTATCCAAGGGCAGTTGCCCCTACTGCTGCTCAGGTGCACTGCTTGCAGTTCTTAATATATGAGGTGGTTTCTGGCGGTAACCTTAGGAGGCCGGGT GGACTCTTTGGGAATAGTGGCTCAGAAATTCCAGTTAATGACTTAAAACAGCTGGAGACATTTTTTTACAAGCTTGGTTTTTTCCTTCATATTTTAGACT ACTCAGTGACTGTAGCAACATTGACGGATCTTGGTTTCCTATGGTTCAGAGAATTTTACTTGGAGTCTTCGCGTGTCATTCAGTTTCCAATTGAGTGCTC TCTTCCCTGGATGTTGGTGGAATGTGTACTTGAGTCACCAAAGTCTGGTCTTCTTGAGAGTGTCCTGATGCCATTTGACATCTATAATGACTCAGCTCAG CAAGCTTTGGTGTTGCTGAAGCAACGGTTTCTGTATGATGAAATTGAGGCTGAGGTGGATCATTGTTTTGATATATTTGTTTCAAAATTGTGTGAAACTA TTTTCACATATTACAAAAGTTGGGCAGCAAGTGAATTGCTTGACCCGTCTTTCCTCTTTGCCTCAGACGATGCAGAAAAGTATGCTGTGCAGCCTATGAG GTTCAATATGCTGCTAAAAATGACTAGAGTGAAGCTACTTGGAAGGATGATTAATTTGCGAAGTTTGATCACTGAAAGGATGAACAAAGTTTTCCGCGAA AATATTGAGTTTCTGTTTGATCGTTTTGAGTGTCAGGATCTGTGTGCCATAGTGGAATTAGATAAGTTGTTGGGTGTTTTAAGACATTCTCATGAACTAA TATCGAGAGATCTTTCCGTAGACTCTTTTAGTCTCATGTTGAATGAGATGCAAGAGAATATCTCTCTTGTGTCATTTTCTAGTCGACTGGCCTCACAGAT TTGGTCTGAGATGCAAGGTGACTTTTTGCCAAATTTCATCCTCTGCAATACTACACAACGTTTTATCAGATCATCAAAGGCTGTTCCTGTTCAAAAACCC TCCATACCCTCTGCTAAGGCTAGTTTCTATTGTGGTACTCAAGATTTGACTTCAGCGCATCAAAGTTTTGCACGATTGCATAGTGGGTTCTTTGGATTAC CTCACATGTTTTCTATTGTTCGAATTTTGGGATCCCGGTCATTGCCTTGGCTTATTAGAGCCCTCCTTGATCACATATCTAACAAGATAACTTCACTTGA GCCAATGATCACAGGATTACAAGAATCCCTTCCAAAATCAATAGGACTTCTGCCTTTTGATGGAGGTGTGACAGGTTGTGTGAGACTTGTTAAAGAACAT CTTAACTGGGAGACAAAGTCGGAGCTGAAATCTGAAGTTCTTCATGGCATAAAAGAGATTGGAAGTGTATTGTATTGGATGGGGCTTCTAGATATCGTGA TGAGAGAAACTGATACTATGAGTTTCATGCAAACTGCTCCCTGGTTGGGCTTTCTTCCTGGAGCAGATGGGCAAATATTAACTTCTCCAGATGGTGGAGA CAGCCCTGTTGTCAGCCTCTTTAAATCAACAGCTGCTGCAATGCTTTCATACCCTGGCTGCCCGTCTCCTACATCTTTTCAAATCATGTCAAAACAAGCA GAAGCTGCAGGTGTGCCAATGAACGTTTTCTATTTTTCATTGTTGGATTGACATGTTCCCTAGTAAAAAAGGTGCATAGGCTTGATGTTGCAAAATAGTT GAGAATGAGCTGAGATTGTACCTGTAGGAAATGAAATAAATAACAGAAAGAAGGAACAAGCTTCAGTTATTTATACCTGAATTTATTAAGTTATCAGCAT AGTATATATACATTATGCATAGCTGTTATGACCTGTGAGTTATGAACATTTCCCCGAAGGAATGAATGATGGTGAAAGATTGGAAAAAGGAAATGGAATC TCTTTTTATCAACâBLAST |
| Tissue | flowers |
| Gene name | LI_gene_54493; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_192636
| Blastp | Protein PIR from Arabidopsis with 80% of identity |
|---|---|
| Blastx | Protein PIR from Arabidopsis with 79.86% of identity |
| Eggnog | cytoplasmic FMR1 interacting protein(ENOG410XPKW) |
| Kegg | Link to kegg annotations (AT5G18410) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019418762.1) |
| Pfam | Cytoplasmic Fragile-X interacting family (PF05994.10) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |