| Id Trinity | FTRINITY_DN55799_c0_g5_i1 |
|---|---|
| Name Transcript | Ll_transcript_192877 |
| Sequence | GAACAACCATGTGGCATAATTTTATCATAAAAAACAAAAAACAGAGAATTCCTATACTATCCTTGTCCCTTTAGGTTTTCCAATGATTCTTATTCTTACA CAGTGATAGTACTTATTACTTATATATCTCCACACACATGCATGCGAATTTGTGAAATTGATTGAGATCGAAGAGTGATCGATGGGTGTGGAAGAAGGTG TTCCTGCTGCTCTTGGATTCCACATGCCTGCTGAATGGGAACGCCATTCTCACTGTTGGATGGGTTGGCCTGAACGGTGTGATAATTGGAGAGATAACGC TATTCATGCCCAACGTCTATTTACCACTGTTGCTTCTGCTATCTCAGCTTTTGAACCTGTTACCATTTGTGCTTCTTCTTCTCAATGGGAGAATGCACGG AATCAACTACCCTTACATATAAGGGTCGTCGAAATCAGCATGAATGACTCTTGGTTTCGTGATACTGGTCCCACTGTCAGTTTCTCTCTCTTTTTTTCCT TCAACTCATTTCTTATTCTTTCTAACAACACTTGCTTTTCATCTTAGCCATCAATTTCTTTGAAATAAATCTAATGCTGTAGATCTATTCGTTAATTCAA ACCATTGAATTTTGAAGAAACTGATGGCTAAGATGAAGAGCAAGCGTAAAAGAGTTACTCTGGGAGTAACTTGATTTGATGCCTCCCCTTTCGTTATTAT CTTCTACTTTGTGACCATTTTCATATAGTTTGAACTGATTCATGTTAGAGTTTGCTTTAACATCCTAAACATGTGGGACTAGCTCGTTGACCTGTTGGGC TAATCATGTTTGGTCCAATATGTTATGGATCTATAGTTAGGAACAGGCATGAGTCATGGCTTCGATCATCTGATTCATGTGTATGAAAATAAAATATGGG TTATAATCTGGAGACTCTGCTTTTTGTTGTTTACACTTTTTCATTCTGTTACTGTTTTTGTTCAATAGTTTGTTGTTAGAAGAAATCCTTCAGAGCCCGG CGATGAACACCATCCGATTGCAGGGATTGACTGGACCTTCAATAGTTGGGGAGGTGTAGAAGATGGATGTTACTCTGACTGGAGTCAGGATACCCTTGTT GCGAGAAAGATTTTGGAAATTGAGAAGATTCCTAAATTTCCGCATTCAATGGTGCTTGAAGGTGGAAGCATCCATGTGGATGGAGAAGGAACTTGTCTTA CCACTGAAGAGTGTCTCTTGAACAAGAATAGGAACCCTCATTTGAGTAAGAGCCAAATTGAGGATGAACTTAAGGCATATCTTGGAATCAGGAAGGTCAT ATGGTTGCCTCACGGATTGTATGGTACATAAACTCGACACTGATCTTTTAGACTAAGAATCTTCTTAATCGATTGAACTTTGCTCAGCATAATTAATTTT GGATTGAGATAGTTAAAGGTTTTATGTGGATCATTTATCATGAGGTGTAGTATAAGGTTAAATACGGATTAGTTATCAGATAAGAATAATTCTGCTTATG AGAAAAGACTTGATTCAGCATATAAGCAATGAAACAATGGAGCAGTATAAGATACAGGCATACAGCTCAGGACAGGATCGGTGGAAAACAAGTCATACAA CCATTTTACAATACTTATCAATTATAATCAGTGAAATCTGATTGTTCTCTAGTTATTAATTCACTTTCTCTCAGTAAATTAACTTCTGTGCTTTTGACTA TGCTTTTACTATGCAAATAAAAGGCTCTTAACTTTCACTATTAGTCTATATTGACTATATAATTATTTTGGAGCATGTAGAATGAAACTCAAAATAAAGT AAAATTGACACATCTCCGTCCATGTTTGGTTGGATGAAAGCTAAATAGAAAAAGTTGGAGGTCTCATCCAGACAACAATAATAACAAGAAGTTGGGACTT AATCTTTTAAGTTAATTTTTTACAAAAGAAATTTAGACACTTATGTAGAGATTATCTGGAAATATTTTGATACTTTTTTAGGTTCGTAGTTACATTTGAA TTTTATATATTCCCTGAAACCTAATTAAGAAGTATGCCGCTCTTATGCAGGAGACGATGATACAAATGGTCATATTGATAACATGTGCTGTTTTGTGAGG CCTGGTGTGGTTCTGCTGTCTTGGACTGATGATGAAACTGATCCACAGTATGAAAGATCTGTAGAAGCATATTCTTTGCTTTCAAGTGTAACTGATGCCA ATAATAGAAAATTGGAAATAATTAAACTCCATGTCCCTGGTCCTCTCTATATGACAGAGGAAGAGGCTGCTGGGGTTTTTCAGGTAAAGTTTTAAGTTTG CATTTCTTTCCTTTTACATTTAAACTTCTATCTCGTAGTAGTTTAAAATTATAAAGAAGGAAGACCGTGTTATCGTTATTTTTCACTTCATTTAACAAAG TACAGAAATAATTTTCAAAATATGATTCCAATGGTCATTGTAGTGTATCTTTAAATGACGCAATGCATAGTCTGTTGCTGTATGGTCATCTGTTTTAGAA CTTTAAGATGTCATATTTGAGTGCACTCTTTTGTTTGTGGCAATATAGTTTGCTATGTCACTGGCCTTATATTTTAAATGTCGGTTGCAAAAATGCTGTC ATCAGACTGGGTACCACACACAGAACCATACAGGTACACCTATGGTTTTGTGGGTATCCACTAAATATTGCCCGAATCATTTTTTAGGAACATCGGTTTG TGATCAGTTGCAGACATTAAAAGTTGACATTTCAAGTGATGGCTATGCTACACCTTATTATATAAAAAATGTATCCTGAGCTCAAAGCAACATTGATGCA TGGATGATGAGGCTAAGCCGAGACTCCCAGGCACTAGGCTTGCTGCTTCCTATGTAAACTTCTACATTGCAAATGGAGCTATTATTACACCACAATTTGG AGATAAAAAATGGGATGATGAAGCTGTCAGAGTCCTATCTAAGGCATTTCCTGATCATAAAGTTGTGGGAATTGAAGGTTCCAGGGAGATTGTTTTGGCT GGTGGAAATATACACTGCATTACTCAGCAACAACCAGACATTTGATCAAATTGTTGCATTGGAGTCTTTATGTTTCAAATTAAATAATTAAATTCCTTGG TTTGCAAGGTGGTGGAATTGTATTGGAAATAAAATTTAACTGGCATTCCAAATTGCAAAATCATGGTTTATTCTGTTGAATGATTGAATCGAATTTTTTT AGAATAAACTAAAACAAGTTTTGCTTTGCTTTTAAGCAGAAGAAACCTTGCATGCATCTATTCAACAAAACTTGATATAAAAT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_54549; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_192877
| Blastp | Agmatine deiminase from Arabidopsis with 70.33% of identity |
|---|---|
| Blastx | Agmatine deiminase from Arabidopsis with 69.83% of identity |
| Eggnog | Agmatine deiminase(COG2957) |
| Kegg | Link to kegg annotations (AT5G08170) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019439055.1) |
| Pfam | Porphyromonas-type peptidyl-arginine deiminase (PF04371.14) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |