| Id Trinity | FTRINITY_DN55818_c1_g3_i18 |
|---|---|
| Name Transcript | Ll_transcript_266981 |
| Sequence | TGAACATAGCCTAGTCTTATTTTACCATTATTTCCAACAGTGTGAGGAAGGAGTCATGAGAATTGAGCAGCATCATTTCCATATACTTGGTCATCATCTT CACCTTCTTCTTCTTCTTAGTATATAGAAGAAAGTGTGTACACACGTCATTCCTTAACGTGCGCACCCCCTGCGTATTGAAATGGAGCCTCACACTTCAT CATTTGTATCCAAAGCGAGAACCGCGCTTCATTCTGCGGCTGCGAAAGCGGAGCGTGTTCTCAATGACTTCAAATCCGATCGAGATTCTGATAAACAATC GAATGATGATTTTGGAGGGAAGCAGCGGCATGAATCTCCTCGGAATGAGAACGAGTCTAAGCTTCTCAGTGAATTGAAGCATATAAAGTGGAGACCACCG CATATAGGAATAAAGCAAGATTGGCAAGATAAATTTAACAATATTCGGAAAGGGAGAAAAGAAGTCGAAGATACAGATAAAATCCGAGACACAAACATGG CCGCTGTTCCATTTTACGATGAAAATTTGTACATCCTGAATATGAAATATGATGCTGATATCAAGGCTTCAGAAGCAATTCCCTCAGTTGAGGGCTTAAT TGCCGCGACTAAAGACCCTATTCCTCCATCTTCTGTCATGAAGCAATTGGCTAAAGCTGTTGAGGCTGGAAGGAAAACAAATTCAATGAAAGATTTTGCA GCTTCAACTGAAGGTTCTTCACCTGCCAAAGATAGGGCAGGCTTAACTCTCTCTGCAATGAAGGCTTTAGTGTTGCGAGAAAAGGAGGATAACCTTACCT CTGAGTTTAGTAGCAATGAGAAAGTTGGGCTCTTGATTAATTCTCTGTTTGATCCAGTTGGCGAGTTCCTCAAAAGGAAGGTAAACTCTTATCCAGATGA AGCTTGCATGACAGCTTTGCCAAGTGATATTCATGGTGCTCCTCCGGAAAGCTTGATTGTTAAGTTAGCTGAAGTCATTGGAAACTTCAAGACGCTTAGA AAAATGGGTCTTTTCTGGTGCAGGATTGTTGTCGAACTGCGAAAATTTTGGTCTGAAGAACAATATTTACCTGGAGTTCCCCCAGATGACATTCCAGATC TGAAGTCATGTCTTCTATATCAACAATTTCAAGTAATTAATTGTTGCATCTCTCGGAAAAGGCGTCATATTATTGCAACCGAATCTCTTGATTCTCTGAT GATGGAAGCCAATTCAAATGTAGAAGAATCAGAAAACAATACCAAGAAAATTCCTGCAAACCATTTATTATATGCTAAATTAAGTACAGGGGAGCTTGTT CTTCGACTAGGTGCCGAGTGCCCATCTGGAGATATGACGTTGTTGGAAACTGGCGAGCCTGTGTACTCTCCTGTCACTCAGGAAGGACCTCTGCTTACAG AAGATCTTATCAAAGAGACTGAGGAGTTTGTGCTGCGGACAGGGAGTGTTGGCGCTGGGTGCTCTCATCTCCTGTCTGATATGCAGGCTTTCAAGGCTGC AAATCCTGGTTGCATTTTGGAAGATTTTGTAAGATGGCACTCTCCTCCTGATTGGACAGAAAGTGAGGCAGGTACTGTGGACAGTGATTTTTTTGATAGT AGTGAGTCGTTGTCCACCAGAGGTCAGCTAAGTCTGCGAATGCAAAAAGAAGGCAATTTGTGGCGCGAATTGTGGGAAACTTCTAAACCAGTACCAGCTG TTAAACAGGCACCTCTGTTTGATGAGGATTTGGCAGTGGAGGGCATCCTCAATGCATTTGAGGACATTCGGCCTTCTGAGCTTTTTGAACAGCTGTTTAT TTCTTTACTTGGTGTAGGATTAGCAATTGCTGAACCTATGCTGTCTGGTGAAAGTGACTTCTCAAAGTTGTTCAATGACTGCAAGGATTACGTAGTTACG ACTTGTCAAAGCAACAAATTTAGTGAGAAAGTTGATGAGCTTGTTCAGGTGGGGGTACTAGAAGAAAATGGGGCTGATTTATGATTCTACTCGGCATCTG AATTAGTCCTAGTATTGATTCTCTCAAGTAAATGTTCAAATTTTCACCAGTGCAGTGAACTCCAAAACTGCTTTATCCATCTAATTGAACAGTCTTTAAC TATATAAAGAGGAGCCTTGAGGAAAAAGGAACTCTTTGGGACTGGTCAAATATTGAGAAATTTGATACCATTTAACCAATCCTACTTTTTTATGTTTAGG TTCACTGACTGATAACTCGACCCGTACGAACATGGCAATGAAAAATAATTCCTCTGAAAATGTAGACTGACAATGATACTGGAAGCTGATGATTTTTATC TTCCTATTCTAAATTACAGAACAATTGTCTAATGGTCACATGATCACATCTATGTGTAGGTATATGAAACAGTGGAGAAAATGTTACTGAAGCCTGAGGA AGTAATAAAGATGATGAAGAAAGCAGAAGAATCAAGTATGACTCCTGGTGAACCAAAGCGTCGGTTTAAGAGACTCCTCCTTATTTTTGGGGGTAAAGAT AAAATGCTGACGAGTCCGGTCTCGAAGGATCAGACTAACGACGAAGAAAACCCGTTTCGACAATCCTTTTCCAGTTTCTTTGACAGCAAGTCATCTTTAT TTTCGAAGAAGCCTCCTAAGCATGGAAGCCTTTCCCCTGCTGAGAATCCTCATTGTTTGGAAAGTGATTGGAAACTTGTCTAGACAGAGTTCAGCCTCAC CCTATTTATGATAAGCAAACATGTTTTTTTGTTTTTTTGTCCCTAGCCAGATCACCGTAAATTATTTTTGTTTATTCCTTTTTAGTGATCAACAAATTTT AATGCATTCTTAAATTACCTAAACTATTACTATTTTTTTATATTTTTTTGTATAGCATTGCTTCTTGGTGAGGGATTGTACAAGGATGATTAGTCAAATG GTATAAAACTTCCCCGTTTCCTGCAAATGTCACGTTGCTTTTGAATATTTTCAAAGAATGCTGTTTTCCCCACTCACCCGTGTAATTCATTTTTAAGCTC AATGTACACCATGAAATTGTAACAATTTGCTTTAGTCTTATAAAAAAGGGTTGGGCAAATATGTAGTGAAAGAATTTAGTTTTAAAACATACCTCTTATG ATGTTACTATTTCCTACTAGTACTTTGAGGTACGTTTGCGAGTTGGGTTTTAGAGGAAAATGAAAGACTTCAACGTCTTCTTTCAAATGTATTTCATAGC TCTCAATTTTTAATTTCTTTTCCTCTCTTAAATGCAACCCGAAAACATACCCTAAT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_54724; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_266981
| Blastp | Rab3 GTPase-activating protein catalytic subunit from Danio with 31.84% of identity |
|---|---|
| Blastx | Rab3 GTPase-activating protein catalytic subunit from Sophophora with 30.77% of identity |
| Eggnog | RAB3 GTPase activating protein subunit 1 (Catalytic)(ENOG410Y2R4) |
| Kegg | Link to kegg annotations (777744) |
| CantataDB | Link to cantataDB annotations (CNT0002243) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019440686.1) |
| Pfam | Rab3 GTPase-activating protein catalytic subunit (PF13890.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |