Ll_transcript_266938

• Id Trinity: FTRINITY_DN55818_c1_g3_i2
• Name Transcript: Ll_transcript_266938
• Sequence: TGAACATAGCCTAGTCTTATTTTACCATTATTTCCAACAGTGTGAGGAAGGAGTCATGAGAATTGAGCAGCATCATTTCCATATACTTGGTCATCATCTT CACCTTCTTCTTCTTCTTAGTATATAGAAGAAAGTGTGTACACACGTCATTCCTTAACGTGCGCACCCCCTGCGTATTGAAATGGAGCCTCACACTTCAT CATTTGTATCCAAAGCGAGAACCGCGCTTCATTCTGCGGCTGCGAAAGCGGAGCGTGTTCTCAATGACTTCAAATCCGATCGAGATTCTGATAAACAATC GAATGATGATTTTGGAGGGAAGCAGCGGCATGAATCTCCTCGGAATGAGAACGAGTCTAAGCTTCTCAGTGAATTGAAGCATATAAAGTGGAGACCACCG CATATAGGAATAAAGCAAGATTGGCAAGATAAATTTAACAATATTCGGAAAGGGAGAAAAGAAGTCGAAGATACAGATAAAATCCGAGACACAAACATGG CCGCTGTTCCATTTTACGATGAAAATTTGTACATCCTGAATATGAAATATGATGCTGATATCAAGGCTTCAGAAGCAATTCCCTCAGTTGAGGGCTTAAT TGCCGCGACTAAAGACCCTATTCCTCCATCTTCTGTCATGAAGCAATTGGCTAAAGCTGTTGAGGCTGGAAGGAAAACAAATTCAATGAAAGATTTTGCA GCTTCAACTGAAGGTTCTTCACCTGCCAAAGATAGGGCAGGCTTAACTCTCTCTGCAATGAAGGCTTTAGTGTTGCGAGAAAAGGAGGATAACCTTACCT CTGAGTTTAGTAGCAATGAGAAAGTTGGGCTCTTGATTAATTCTCTGTTTGATCCAGTTGGCGAGTTCCTCAAAAGGAAGGTAAACTCTTATCCAGATGA AGCTTGCATGACAGCTTTGCCAAGTGATATTCATGGTGCTCCTCCGGAAAGCTTGATTGTTAAGTTAGCTGAAGTCATTGGAAACTTCAAGACGCTTAGA AAAATGGGTCTTTTCTGGTGCAGGATTGTTGTCGAACTGCGAAAATTTTGGTCTGAAGAACAATATTTACCTGGAGTTCCCCCAGATGACATTCCAGATC TGAAGTCATGTCTTCTATATCAACAATTTCAAGTAATTAATTGTTGCATCTCTCGGAAAAGGCGTCATATTATTGCAACCGAATCTCTTGATTCTCTGAT GATGGAAGCCAATTCAAATGTAGAAGAATCAGAAAACAATACCAAGAAAATTCCTGCAAACCATTTATTATATGCTAAATTAAGTACAGGGGAGCTTGTT CTTCGACTAGGTGCCGAGTGCCCATCTGGAGATATGACGTTGTTGGAAACTGGCGAGCCTGTGTACTCTCCTGTCACTCAGGAAGGACCTCTGCTTACAG AAGATCTTATCAAAGAGACTGAGGAGTTTGTGCTGCGGACAGGGAGTGTTGGCGCTGGGTGCTCTCATCTCCTGTCTGATATGCAGGCTTTCAAGGCTGC AAATCCTGGTTGCATTTTGGAAGATTTTGTAAGATGGCACTCTCCTCCTGATTGGACAGAAAGTGAGGCAGGTACTGTGGACAGTGATTTTTTTGATAGT AGTGAGTCGTTGTCCACCAGAGGTCAGCTAAGTCTGCGAATGCAAAAAGAAGGCAATTTGTGGCGCGAATTGTGGGAAACTTCTAAACCAGTACCAGCTG TTAAACAGGCACCTCTGTTTGATGAGGATTTGGCAGTGGAGGGCATCCTCAATGCATTTGAGGACATTCGGCCTTCTGAGCTTTTTGAACAGCTGTTTAT TTCTTTACTTGGTGTAGGATTAGCAATTGCTGAACCTATGCTGTCTGGTGAAAGTGACTTCTCAAAGTTGTTCAATGACTGCAAGGATTACGTAGTTACG ACTTGTCAAAGCAACAAATTTAGTGAGAAAGTTGATGAGCTTGTTCAGGTATATGAAACAGTGGAGAAAATGTTACTGAAGCCTGAGGAAGTAATAAAGA TGATGAAGAAAGCAGAAGAATCAAGTATGACTCCTGGTGAACCAAAGCGTCGGTTTAAGAGACTCCTCCTTATTTTTGGGGGTAAAGATAAAATGCTGAC GAGTCCGGTCTCGAAGGATCAGACTAACGACGAAGAAAACCCGTTTCGACAATCCTTTTCCAGTTTCTTTGACAGCAAGTCATCTTTATTTTCGAAGAAG CCTCCTAAGCATGGAAGCCTTTCCCCTGCTGAGAATCCTCATTGTTTGGAAAGTGATTGGAAACTTGTCTAGACAGAGTTCAGCCTCACCCTATTTATGA TAAGCAAACATGTTTTTTTGTTTTTTTGTCCCTAGCCAGATCACCGTAAATTATTTTTGTTTATTCCTTTTTAGTGATCAACAAATTTTAATGCATTCTT AAATTACCTAAACTATTACTATTTTTTTATATTTTTTTGTATAGCATTGCTTCTTGGTGAGGGATTGTACAAGGATGATTAGTCAAATGGTATAAAACTT CCCCGTTTCCTGCAAATGTCACGTTGCTTTTGAATATTTTCAAAGAATGCTGTTTTCCCCACTCACCCGTGTAATTCATTTTTAAGCTCAATGTACACCA TGAAATTGTAACAATTTGCTTTAGTCTTATAAAAAAGGGTTGGGCAAATATGTAGTGAAAGAATTTAGTTTTAAAACATACCTCTTATGATGTTACTATT TCCTACTAGTACTTTGAGGTACGTTTGCGAGTTGGGTTTTAGAGGAAAATGAAAGACTTCAACGTCTTCTTTCAAATGTATTTCATAGCTCTCAATTTTT AATTTCTTTTCCTCTCTTAAATGCAACCCGAAAACATACCCTAAT
• Tissue: flowers
• Gene name: LI_gene_54724;
• Additional information: details;

Expression of Ll_transcript_266938

FPKM

• FPAB: 0.3
• FPNAB: 0.4
• LF1: 0.7
• LF2: 0.4
• LF3: 0
• LF4: 0.2
• UF1: 0.5
• UF2: 0.8
• UF3: 0.8
• UF4: 0.2

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_266938

• Blastp: Rab3 GTPase-activating protein catalytic subunit from Danio with 31.84% of identity
• Blastx: Rab3 GTPase-activating protein catalytic subunit from Sophophora with 30.77% of identity
• Eggnog: RAB3 GTPase activating protein subunit 1 (Catalytic)(ENOG410Y2R4)
• Kegg: Link to kegg annotations (777744)
• CantataDB: Link to cantataDB annotations (CNT0002243)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019440686.1)
• Pfam: Rab3 GTPase-activating protein catalytic subunit (PF13890.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;