Ll_transcript_267342

• Id Trinity: FTRINITY_DN55827_c1_g1_i9
• Name Transcript: Ll_transcript_267342
• Sequence: GGCGAACTCGCTTTGGGAAAAAACGTATTAGTAGCTTATATGCCATGGGAAGGTTACAATTTTGAAGATGCTGTACTCATTAGTGAGCGTTTGGTCTATG AGGATATTTATACTTCTTTTCACATACGGAAATATGAAATTCAGACTCATGTGACAAGTCATGGTCCGGAAAGAATCACTAATGAAATTCCACACCTCGA AGCCCATTTACTCCAAAATTTAGACAAAAATGGAATTGTGATCCTGGGATCTTGGGTTGAGTCAGGCGATATTTTAGTGGGTAAATTAACCCCCCAAATG GCGAAAGAATCCTCGTATGCCCCAGAAGATAGATTATTACGAGCTATACTTGGCATTCAGGTATCCACCTCAAAGGAAACTTGTCTAAAACTACCTATAG GCGGGAGAGGTCGAGTTATTGATGTGAGATGGATCCACAAAAAGGGGGTTTCTAGTTATAATCCAGAAACGATTCGTATCTATATTTTACAGAAACGTGA AATTAAAGTAGGTGATAAAGTGGCCGGGAGACATGGAAATAAAGGTATCGTTTCAATAATTTTGTCTAGACAGGATATGCCGTATTTGCAAGATGGAAGG CCCGTTGATATGGTCTTCAATCCATTAGGGGTACCTTCACGAATGAATGTAGGACAGATATTTGAATGTTCACTAGGATTAGCGGGGTTTATGCTAGATA GACATTATCGAATAGCACCTTTTGATGAGAGATATGAACAAGAGGCTTCGAGAAAACTTGTGTTTTCTGAATTATATGAAGCCAGTAAACAAACAGCGAA TCCATGGATATTTGAACCCGAGTATCCGGGAAAAAGCCGAATAGTTGATGGAAGAACAGGGAATCTTTTTGAACAGCCTGTTTTAATGGGAAAGCCCTAT ATCTTGAAATTAATTCATCAAGTTGATGATAAAATACACGGACGTTCCAGTGGACATTATGCACTTGTTACGCAACAACCCCTTAGAGGAAGGGCCAAGC AAGGAGGACAGCGGGTAGGCGAAATGGAGGTTTGGGCCCTCGAGGGATTTGGTGTTGCTCATATTTTACAAGAAATGCTGACTTATAAATCTGATCATAT TAAAGCTCGCCAAGAAGTACTCGGGATTACGATCATTGGCGGAACAATACCTAAACCTGCGGATGCTCCAGAATCTTTTCGTTTGCTCGTTCGAGAATTA CGATCTTTGGCCCTGGAACTGAATCATTTCCTTATATCTGAGAAGAACTTCCGTATTCATAGGAAGGAAGCTTAATTCGCCCGAATCTTACTTTTGATTC TATGATTGATCAGTATAAACATCAACAACTCCGAATTGGATTAGTTTCTCCTCAACAAATAAGTTCTTGGGCAAAAAAAATTCTACCTAATGGAGAGATA GTTGGGGAGGTAACAAAACCCTATACTTTTCATTACAAAACCAATAAGCCTGAAAAAAGTGGATTATTTTGTGAAAGAATTTTTGGGCCTATAAAAAGTG GGATTTGTGCTTGTGGAAATTATCGAGTCATCGGGGATAAGAAAGACGATAAACAATTTTGTGAACAATGCGGAGTAGAATTTGTTGATTCTCGAATACG TAGGTATAAAATGGGCTATATAAAACTGGCATGCCCCGTAACCCACGTGTGGTATTTGAAACGTCTTCCTAGTTATATCGCGAATCTTTTAGATAAATCT CTGAAAGAATTAGAAGGTCTAGTATACTGCGATGTGTGATTTGATCAAAATTCTTATTTTATTGTACAGATTCCGAATGAGAAACTGTTATTCCAGTCAA TTGAATTGGCATGCCCCGGATCTGACATGTATGTCTCTTTGGCCGAGTAACATGAAGCTCAGAATTATGGGTATATTAAATACTCTAAAAAAAAAAAGGG GGGGGTTGGTCTATGGTCCATTCAGTAATAGCTGTTACCTCGTGAAAAAAAAAAAGCCTTTTTTGAAATTTTATATTCCATTTCTTTTTTTTAGAAAGAA CTTTATTTAAGTTTCAATAAGCAAATATATCATGGTTACAGAAGTTCTATCCATCGCATATAGGCTTAAGGACATCGTGGCATAACCATCGAGGTGAAGT CTGGACCTAAAAGATCGAATCGAATGGAATGATACATAGACAAGGAAATCTCTTATGAATTCCAGGATATCCCTTTAATTGTAAATTAAGAAGGTTCCTC ATTCGAGGGGGGTAGACTACTCAAAAATTTTACATTTAATTTCTGTTGTAATTGAAAATCGGACAAATAATTCATAAAATCGAAATAAAAAAAGAATGCA TCAATGAAATGTTGCTTGGTCTTTATTGTATTGAAAAATTGAGTAAAGAGTAAAATAAAACTTTTTTTTTAGATTAGAGTTTATAGAACTTGAAAGCGGA AACCCCTTATTTGGTGTAACTACTTTAGCCGGATGAGAGGAAACTTTCACGTCCGATTTTGAAAGGGGGAGATCCTATTGGATAGGATCCTATCCAAATT TTTCGTTTGCTAGGCCCGTAGTTAAAAAACCCACTTTCTTACGATTACGAGGTTTATTTGAATATGAAATCCAATCCTGGAAATACAACATCCCGCTTTT TTTTACTACCCAAGGTTTCAATATATTTCGAAATCGAGAAATTTCTAGTGGAGCGGGTGCTATCCGAGAACAATTAGCCGATCTAGATTTGAGAATTCTT ATTGATTCTTCGTTGGTAGAATGGAAAGGATTAGCGGAAGAGGGATCCGCGGACAATGAAAATGAATGGGAAGATCGAAAAGTTGGAAGAAGAAAGAATT TTTTAGTTCGGCGCATGGAATTAGCTAAGCATTTTATCCGAACAAATATAGAACCAGAATGGATGGTTTTATGTCTCTTACCTGTTCTTCCTCCCGAATT GAGACCTATTATTCAAATAGACGGGGGTAAACTAATGAGCTCGGATATTAATGAACTCTATAGAAGAGTTATCTATCGGAACAATACCCTTATTGATCTA TTAACAACAAGTAGATCTACGCCAGGGGAATTAGTCATGTGTCAGGAGAAATTGGTACAAGAAGCCGTAGATACACTTCTTGATAATGGAATCCGCGGAC AACCAATGAGAGATGGTCATAATAAGGTTTACAAATCGTTTTCAGATTTAATTGAGGGCAAAGAGGGACGATTTCGTGAGACTCTACTTGGCAAACGGGT TGATTATTCGGGGCGTTCTGTCATTGTCGTAGGTCCATCACTTTCATTACATCGATGTGGATTGCCCCGCGAAATAGCAATAGAACTTTTCCAGACATTT GTAATTCGTGGTTTAATTCGAAAACAATTTGCTTCGAACATAGGAATTGCTAAGAGTAAAATTCGGCAAAAGGAACCCATTGTATGGGAAATACTTCAAG AAGTTATGCGGGGACATCCCATATTGCTGAATAGAGCGCCCACTTTGCATAGATTAGGCATACAGGCATTCCAACCCATTTTAGTAGAAGAGCGTGCTAT TTGTTTACATCCATTAGTTTGTAAGGGATTCAATGCAGACTTTGATGGGGATCAAATGGCTGTTCATGTGCCCTTATCCTTGGAGGCTCAAGCAGAAGCT CGTTTACTTATGTTTTCTCATACGAATCTCTTGTCTCCGGCTATTGGGGATCCCATTTCCGTACCAACTCAAGATATGCTTATTGGGCTTTACATATTAA CGAGCGGGAATCGTCGAGGTATTTGCGCAAATAGGTATAATACGCGTAATTGCAGAAATTATAAAAATGAAAGAATTCACGAAAATGACTATAAGTATAC GAAAAAAAAAAAATCTTTTTTTTGTAATTCCTATGATGCAATTGGAGCTTATCGACAGAAAAGAATCAATTTCGACAGTCCTTTGTGGCTCCGGTGGCGA CTAGATCAACGCGTTATTTCGTCAAGAGAAGCTCCTATCGAAGTTCACTACGAATCTTTAGGTACCTATCATGATATTTATGAGCATTATCTAGTAGTCA GAAGTATAAAAAAACAAATTCGTTGTATATATATTCGAACCACTGTTGGTCATATTTCTTTTTATCGAGAAATCGAAGAAGCTATACAAGGCTTTTGTCG AGCCCATTCATAGGGTATCCAATCATATACATAGATGGGTTGGTATCTAACCTAAGTCAATTTAGGATATCGGTGTGAATTCCGGTCTTCCCGGTTCGAC TATATGATCCTAACTTATAAATTTCTACGCGAATCAAGCTAAAGAAAAGGAAGTTTTACAATCATTGACTCAAATCCATTGTTGAACCGAACTCCACTGA TCGGAATATGGAGGTACTTATGGCAGAACGGGCCA
• Tissue: flowers
• Gene name: LI_gene_54793;
• Additional information: details;

Expression of Ll_transcript_267342

FPKM

• FPAB: 0.9
• FPNAB: 0.6
• LF1: 0.8
• LF2: 0.8
• LF3: 0.7
• LF4: 1.1
• UF1: 0.8
• UF2: 0.6
• UF3: 0.2
• UF4: 0.6

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_267342

• Blastp: DNA-directed RNA polymerase subunit beta from Soja with 93.4% of identity
• Blastx: DNA-directed RNA polymerase subunit beta' from Soja with 92.45% of identity
• Eggnog: DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (By similarity)(COG0085)
• Kegg: Link to kegg annotations (3989291)
• CantataDB: -
• Mirbase: bdi-MIR5056 (MI0017945)
• Ncbi protein: Link to NCBI protein (YP_008963596.1)
• Pfam: RNA polymerase Rpb2, domain 6 (PF00562.27)
• Rfam: Intron_gpII (RF00029)
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;