Id Trinity | FTRINITY_DN55832_c0_g2_i1 |
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Name Transcript | Ll_transcript_269330 |
Sequence | AGACACTTGTGGTAGTACACCATCTGTCCCTCTGCTACACTGTTTGTTGGCATGTGTCTGTTCCTTCTTCACACTCCATTTCTATTCATATCCCTCACCA ATTCCAAATAACTCATCATTCATTCCTCAATCACTATTCATCATTCCACTTCACTACATTTGCAGATTACTGATTTTTTTGAGCTCTTCTGATGGACTGG AATGCAAAATCTCCCTCACAGTGGGATTGGGAGCATCCACTCTTACTCAATGCAAAAACAACTGAAATTTCCAAATCACTGCCACCAAACAGGAACGGTG AAACAAACCAAGAGATCAATGTTGGGTTGTTGGATTCATCTGTCGGCAGTGGCTGTTCTGGGTCTGAGCTAATACATGCTTCATCAAGGAGCTCAATATC AGCTTCCATCAATTCATCATCAAATAGGGATAGCAAAACATCTATGTACACTTTTGAAACTTCCCTTGATGGTTCCACTGGTAAAAGAGAATTGTCTAAA GTTCAAATTTCTCATAGACTAGAGCCCTCATCTGCCTCTGGTGAATCACTTCTCTCTCTGAAACTTGGTAAGCGGCTGTACTTTGAGGATGTCTACTCCG GAAGTATTTCAAAGAGCCCGTCTTTTTCTGGGGCTCCTATGTCATCTTTGAGTACTGGTAAAAAATGCAAGTCCAATGGTCAGAATGTACAGTTTCCACG CTGCCAGGTTGAAGGCTGTGGCCTTGATCTCTCATCAGCTAAAGATTACCATTCCAAACATAGAGTTTGTGACAGTCATTCCAAATCCCCTAAGGTGCTA ATAGCTGGTATGGTGTGTCGATTTTGCCAGCAATGCAGCAGGTAAAGCTTCTTAAGTAACATCTAGTTCGTTGTTTGAAAATGAATATGGTCTGAGTATT AACTCCCâBLAST |
Tissue | flowers |
Gene name | LI_gene_54843; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_269330
Blastp | Squamosa promoter-binding-like protein 12 from Oryza sativa with 42.79% of identity |
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Blastx | Squamosa promoter-binding-like protein 12 from Oryza sativa with 43.04% of identity |
Eggnog | Squamosa promoter-binding-like protein(ENOG410YKP9) |
Kegg | - |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019464820.1) |
Pfam | SBP domain (PF03110.13) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |