| Id Trinity | FTRINITY_DN55832_c0_g2_i3 |
|---|---|
| Name Transcript | Ll_transcript_269336 |
| Sequence | AGACACTTGTGGTAGTACACCATCTGTCCCTCTGCTACACTGTTTGTTGGCATGTGTCTGTTCCTTCTTCACACTCCATTTCTATTCATATCCCTCACCA ATTCCAAATAACTCATCATTCATTCCTCAATCACTATTCATCATTCCACTTCACTACATTTGCAGATTACTGATTTTTTTGAGCTCTTCTGATGGACTGG AATGCAAAATCTCCCTCACAGTGGGATTGGGAGCATCCACTCTTACTCAATGCAAAAACAACTGAAATTTCCAAATCACTGCCACCAAACAGGAACGGTG AAACAAACCAAGAGATCAATGTTGGGTTGTTGGATTCATCTGTCGGCAGTGGCTGTTCTGGGTCTGAGCTAATACATGCTTCATCAAGGAGCTCAATATC AGCTTCCATCAATTCATCATCAAATAGGGATAGCAAAACATCTATGTACACTTTTGAAACTTCCCTTGATGGTTCCACTGGTAAAAGAGAATTGTCTAAA GTTCAAATTTCTCATAGACTAGAGCCCTCATCTGCCTCTGGTGAATCACTTCTCTCTCTGAAACTTGGTAAGCGGCTGTACTTTGAGGATGTCTACTCCG GAAGTATTTCAAAGAGCCCGTCTTTTTCTGGGGCTCCTATGTCATCTTTGAGTACTGGTAAAAAATGCAAGTCCAATGGTCAGAATGTACAGTTTCCACG CTGCCAGGTTGAAGGCTGTGGCCTTGATCTCTCATCAGCTAAAGATTACCATTCCAAACATAGAGTTTGTGACAGTCATTCCAAATCCCCTAAGGTGCTA ATAGCTGGTATGGTGTGTCGATTTTGCCAGCAATGCAGCAGGTTCCATGGTCTGTCAGAGTTTGATGAGAAAAAGAGAAGCTGCAGAAGACGCCTTTCAG ATCACAATGCAAGGCGCCGTAAACCACATCCAGTAGCCACCCGATTAAACCAACCATCATCACCCTATGAAGGGAGGCAACATATGAGCCCTTTGGCTTA TTCAAGGACTGCTACAAATTTAGCTTGCCAAGACACACACAGCAGCAAGCTTCCCCAGACAAAAGATTTTCTATTCAATCCGGCCAAAGCCAATAATGAG ATACCAAGTATTGGCACTATGGTTTCTTATGATTTCAACCCCCCTTTTACACTCAAAGGCATTGCAACCAAAAGTGCTAACAGAGGCTTAGAAGACTCGA TTGCCTCTTCCGATCATAATGTTACACAAGACTTTGACCGTGCTCTCTCTCTTCTGTCAAGCAACTCCTGGGGGGGTTCACATGAGCACAAGCTCATTTC TGTAGAACCACCCGACAACGCAATTGTAACCGGTCAGCCTGTAACGCATGCTATGAGTCAGTGCTTACCTCCAGAATATTGGCACATTGGTCAACAACCA GTGAATTCTAGCATGTGGATCTCCTACTCGAATTGTGATGATAGCAATCGCTTCCAAGAATTTCAACTGTTCAGAGAACCTTATGAGTCTGGTTTTCCTC ACAACCAGTTGGGTTAACAAGAGTTATCACCCCAATAGTTTCAGCCAGATAAATTTACAGACACAAGGTTAGTTCCATCTCATATTCCTTAACTTGCAGT GCTCAATTTTTTTATACAATACTAGGATGGCTGGTTGTGTTTATTTTATTTGTTTTGTTTTTTACATGAATGCCTCAACTCTTCTACTCTACTTGTCAAT GTCTTTTCTCATCCATGGTGCATTATATGTTTGTTGAAAGTTAAATCTCCTTTAAGTTGCCTTGTGTAGATCTTTGATAATCAGTTAATCACCCCTCCAC AGTTTCAATTAATTTAAAAAATTAGAAATGAAATCACAAAGTTTTCAAAATAGCAATTGAACAAAAGAAGTTCCTAGTTTTCTTTAGTTTGTTGACTAGG ATTTTTCCTAGCCTTGAAAATATATCCATGAGTGCTTTTTTGTTTAAAGTGGAGAAATCAAATTACTCTTGGAGTAACTTGATTCCCTCCCTTATTTAAA TATTTTACTGACTTTATGTAGTAACTATAGACCTACTCACCTACCTCTATCTGGAAGTACTTTTTGGAATGCATTTCTCGTTTTTTTCCTGCCCTATATA GTATTTCACTCTCCACCTAGAGAGTACACAACCAAATGTATACACTACCCACAGTCAGAGAATTCCTCACAATTTAAATGTAATTACTGTTTTGTTGAAC TTGAACTGCTGGTTAATTTTAACATAACATCTTAGTCATATATCTATGCAGTTATATTTATATTCTATCTCTTTTATCAAGTGGATTTATGTCGATTATT TTTTACAATCCAAATTGTTGGTTCTACTTGCAGGTTTATATGTTTGCAACTGTGGAAAGATGCTAATTTGTTGTCTTTTGTTTATTTATTATTATTGCAC AATTTTCCTCCCTTATAAACGCAAAGGACGAGATTATTTTGAGGATGTGTTGCTGGACGGAATGGTAGTTGAAAAAATTTAATATGGTATATTTTATGGA CAAGTGTATTCTATATTCTAACTCTTGCTTTTTTTATTACAACATCTAATTCACTTATTTATTTCTAAAGTATATTGTGTCATTAAATAGTTATTTCTTA TTTATAATGGAGGTAG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_54843; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_269336
| Blastp | Squamosa promoter-binding-like protein 12 from Oryza sativa with 40.7% of identity |
|---|---|
| Blastx | Squamosa promoter-binding-like protein 12 from Oryza sativa with 40.7% of identity |
| Eggnog | Squamosa promoter-binding-like protein(ENOG410YKP9) |
| Kegg | - |
| CantataDB | Link to cantataDB annotations (CNT0002899) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019464820.1) |
| Pfam | SBP domain (PF03110.13) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |