| Id Trinity | FTRINITY_DN55836_c2_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_267236 |
| Sequence | TTCTGTGTTGTCGCAAATCTCTCTCATTTGTCAATCAAAATTCTTTTATTTTCCTCGCAAGAATAATTTGAACTTTCCGTAACATTCTTCGTTGTAACAA TAGGGAAGAAATGATGGCTCCCTAGTCTAAGACATCCTCCTATGGTTAATTACTGTATTGAAACTTGGTTTCATTTCCTATTTCAAACATAGCTACAATA GTTTCAGGGGCAATGATTTTCTTCTATAATAAGTTAGTACATATTTTCTTTTTTTGCTAGAAAACTAAATAAGAGGTGTTGGTGTATCAATTAGAAACAA TGTCTAGCCAACCTTCAAAGAAGTCTTTGAGAAATTCTGGAGGAGGACCAGGATCATCAGGTAGTTCTCAAGGCGGAGCTCGTGACAGCTCCGGCGGGCC AAGTGTGAAGTTTGCAAGAAGGACATCAAGTGGGAGATATGTGAGTTTGTCAAGAGAAGATATTGACATGTCCTCAGAATTATCTGGGGACTATATGAAT TACACTGTTCATATTCCACCTACCCCAGAACATGAACCTTCGGACACTTCTATTGCTATGAAAGCTGAAGAGCAATATGTTTCTAATTCATTATTCACAG GAGGATTCAACAGTGTAACCAGGGCTCATCTAATGGATAAGGTGATTGATTCTGAAGTTACTCACCCTCAAATGGCTGGTTCTAGAGGTTCTGCATGTGC AATGCCTGCGTGTGATGGCAAGGTCATGAAGGATGAGAGAGGAAATGATGTGATGCCATGTGAGTGTAGGTTCAAGATTTGCAGAGATTGTTTTATAGAT GCACAAAAAGAAAACAATCTCTGCCCTGGTTGTAAGGAGCCGTACAGAATAGGGGATTATGACGATGATACCCCAGATTATTCTAGTGGGGCACTTCCAT TACCTGCACCAAATGGAAAACATGATACAAACATGTCTGTTATGAAGAGGAACCAAAATGGAGAATTTGACCACAATAGGTGGTTGTTTGAAACCAAAGG AACATATGGGGTTGGCAATGCTTATTGGCCCCCAGATGATATGTATGGTGATGATGGTGATGATGGCCTTCGAGGAGGAATGATAGATCCCATGGATAAG CCATGGAAACCTTTAAGTCGGAAAACACCTATACCATCTTCTATCATGAGTCCTTACAGATTGCTTATTGCAATTCGACTAGTAGTATTGGCCTTCTTTT TACAGTGGAGAGTGGTGCATCCTAATAAAGATGCAATATGGCTCTGGTTAATGTCAATTGTTTGTGAGATATGGTTTGGTTTCTCATGGATACTTGACCA GATTCCAAAGTTGTGCCCTGTCAATCGTTCCACTGATCTTGAAGTTCTTCATGAAAAATTCGATAGTCCATCGCCATCCAATCCCACGGGACGCTCTGAT CTACCTGGTATGGACCTCTTTGTCTCAACAGCAGATCCTGAAAAGGAGCCAGTTCTTGTTACTGCCAATACAATTTTATCTATATTAGCTGTTGATTACC CTGTGGAGAAGCTTGCATGTTACGTTTCTGATGATGGAGGTGCTCTCTTGACATTTGAAGCCATGGCTGAGGCGGCAAGTTTTGCTGATTTATGGGTTCC CTTTTGCCGAAAACACAACATCGAACCGAGGAACCCCGACACTTACTTTAGCTCAAAAGTTGATCCAACCAAGAATAAAAGAAGAATAGATTTTGTGAAA GATAGAAGGCGAGTCAAGAGGGAGTATGATGAGTTCAAGATACGAATAAATGGCCTTCCAGATTCAATAAGGAGAAGATCAGATGCATTTAATGCAAGGG AGGAAATGAAGATGATGAAACACATGAAGGAGAGTGGAGCTGACCCTTCAGAGCCAATCAAAGTATTGAAGGCAACATGGATGGCTGATGGCACCCATTG GCCTGGTACTTGGGCCTCTTCTTCTAGGGAGCACTCTAGGAGTGACCATGCTGGAATACTTCAAGTGATGTTGAAGCCACCAAGTTCTGATACGTTAATG GGAAGTGGAGATGATAAGATAATAGACTTCTCAGATGTAGATACACGATTACCAATGTTTGTATATGTTTCTAGAGAGAAGAGGCCAGGTTATGATCACA ACAAGAAAGCTGGTGCAATGAATGCACTAGTTCGAGCATCTGCTATTCTGTCAAATGGGCCATTTATTCTCAATCTTGATTGTGATCACTACTTCTACAA TTGCAAAGCATTAAGAGAAGGAATGTGCTTCATGATGGACAGAGGTGGAGAGGATATATGTTATATTCAGTTCCCACAAAGATTTGAAGGCATTGATCCC TCTGATCGTTACGCTAATCACAACACTGTCTTCTTTGATGGAAACATGCGAGCCCTTGATGGTGTTCAAGGTCCATTCTATGTGGGAACTGGATGCATGT TTCGGAGGTTTGCACTCTACGGTTTTGAACCACCGAATGTGGATATAAAAGATCCGAAAAAGAGTGAAGGATCTGAAACATCAACATTCAATCTTAGTGA GTTAGATCAAGATCTAGATATCAACCTATTACCCAAGCGCTTTGGTAATTCTACCATGTTGTCTGAGAGCATACCAGTCGCTGAGTTTCAAGGTCGTCCT TTAGCAGACCATCCTGCCGTCAAGTTTGGGCGTCCACCTGGTGTTCTTAGGGTCCCTCGTGAGCCACTTGATGCTACTGCTGTAGCTGAAGCTGTCTCCG TCATATCTTGTTGGTATGAGGACAAGACAGAATGGGGAGATAGAGTGGGATGGATTTATGGGTCAGTGACAGAAGATGTGGTCACAGGGTACCGCATGCA CAACCGTGGATGGCGCTCTGTGTATTGTGTAACAAAACGAGATGCATTTCGTGGATCAGCACCTATCAATCTCACTGATCGACTACACCAAGTGTTGAGA TGGGCCACTGGTTCCGTTGAAATCTTCTTCTCTCAAAACAATGCCTTTCTTGCTAGTAGGAAGCTCAAATTTCTCCAACGTATCTCATACCTTAATGTTG GCATCTACCCTTTCACCTCAATCTTCCTTGTTGTATATTGCTTCCTCCCTGCACTCTCTCTATTTTCGGGATACTTCATTGTTCAAACTCTCAGTGTTGC ATTCTTAGTCTACTTGCTCACCATCACAATATGCCTAGTATTGTTGGCTATTCTAGAGGTAAAGTGGTCTGGGGTAGAGTTAGAGCAATGGTGGAGGAAT GAACAATTTTGGTTAATCTCGGGAACTAGTGCTCACCTAGCTGCTGTGGTGCAAGGACTCCTTAAAGTCATTGCAGGTATTGAGATTTCTTTCACATTGA CGACAAAATCATCATCCGAAGAGGAGGAAGATATATATGCTGATTTGTATATTGTTAAGTGGAGCTCCTTGATGATTCCACCAATCGTTATTGCTATGGT GAATATCATTGCCATTGTATTTGCATTTATTAAGACAATTTATAGTACAACCGCACAATGGAGTAAATTCATTGGAGGAGCATTCTTTAGTTTCTGGGTA CTTGTTCATTTGTACCCATTTGCAAAAGGGTTGATGGGGAGAACAAGGAAAACACCAACAATTGTATTTGTTTGGTCAGGTCTCATTGCAATTACCATTT CTCTTCTTTGGATTGCCATTAGCCCACCTAAGGGAGGCGGTGGACAAGGTGTAGCAGGTGACTTTCAATTCCCATAAAATACTAATTGGAGCTCATCGAG TCTTATTTTATATATAATGTATATTGTTGTAAACTTCCATTTGACATGTCTTGAGATATATAATAGAAGGAAAAGTAAATGCATTAGGATTGGGCTAGTG GTGAGGGGCTTGGGTAGTTTGTATGTCATACGTTTAAACTTCATTGTCAACCTTGTACCAAAGAAAAATAATAGGAAAAGAAACCCCTTTTAGAGTTTTT ATAAAAATGTTATGTGGGAAGAATGTAAAAAGGAACATAAATTAAGAGAACTATTTT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_54878; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_267236
| Blastp | Cellulose synthase-like protein D4 from Arabidopsis with 83.27% of identity |
|---|---|
| Blastx | Cellulose synthase-like protein D4 from Arabidopsis with 83.49% of identity |
| Eggnog | Glycosyl transferase, family 2(COG1215) |
| Kegg | Link to kegg annotations (AT4G38190) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019454873.1) |
| Pfam | RING/Ubox like zinc-binding domain (PF14570.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |