Id Trinity | FTRINITY_DN55844_c1_g1_i13 |
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Name Transcript | Ll_transcript_268406 |
Sequence | ATTCCTTTGCTAAGTATAACAAGTCTGTTGAGATTATCAAATACACAGAGGAGGAGTATGAGAAGTATTTGACAGATCCTGCTATTCACAGTGAGCTTTT ATGGTGCCATCCTAGGGTTGTTTTCTTTATTCCTTGATTTGACACAGATTTAGTTTAAAATATTGATAAATCCTCGAAACTCAAGAGAATAGTGTGAACT CGGATTAATATACAAATTTGTGGGGGTATCATGATTCCATATGCATGACCAGGATCATGACATTCATGACTGTAATTAGAATTTGATGTGGACCAAGGAG GAGACAGACCAACTATTTGATTTGTGTGAGAGGTTTGATCTCCGATTTGTTGTAATAGCTGATAGGTTCCCGTCATCTCGGACTGTAGAGGAATTAAAGG ATCGATATTACAGTGTATGCCGGGCTATATTAATTGCTAGAGCTCCATCTTCTGGGGATGTTGCAGCAAATCCTCTTGTTAAGGACCCTTATAATGTTTC ACAAGATATAGAGAGAAAACGAGCACTGTCCATGGTGCTCTCTCAAACAAGGCAACAAGAGCGAAGAGATGAAGAGGTTCTTGTTGAAGCAAAAAGAATA GCTGAGTTACGCATGCCAGCTAAGGCTGCTGAAGAGTCTCAGTTGGCTGTTGCCTCAAATCCTGGTGCAGAAATTACAGAGAGGATTATCCCAGGTGAAA CTCCATCTTCATCAATGGTTGTGCCTTCCACATTAACAGATAATGCAGCAACTTTAGCTTCTCTTCGCACTCTTCGTGTATATTTGAGAACATACGCACT TGAGCAAATGGTGCAAGCTGCGAGCTCATCTGCTGGGCTTCGGACTATCAAACGGATTGAGCAAACATTGCATGATCTTGGGGTCAATTTGAAACCAAGG GTTCCAACAAAAGCTGTTTGCGCAGAGCATCTTGAACTAAGAAAAGAAATACTAATTTTACTTAATCTTCAGAAGCAGGTGAAATATAAAGAGGCTGAAG GTTCAATTCGTGATGGGTTATATGGGGAATCACCAGAAACACCAAAGGTTAGAAATCTGGCTTAGTTTTAGTACTCTTCCCTCTATTTTTTGTTCATTGT TTTAGGCTTGTGATTGTCCAAGCATGCGGTTTATTA BLAST |
Tissue | flowers |
Gene name | LI_gene_54954; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_268406
Blastp | SWR1-complex protein 4 from Arabidopsis with 65.56% of identity |
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Blastx | SWR1-complex protein 4 from Arabidopsis with 65.56% of identity |
Eggnog | DNA methyltransferase 1 associated protein 1(ENOG410XSA4) |
Kegg | Link to kegg annotations (AT2G47210) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019422059.1) |
Pfam | SANT/Myb-like domain of DAMP1 (PF16282.4) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |