| Id Trinity | FTRINITY_DN55845_c0_g5_i1 |
|---|---|
| Name Transcript | Ll_transcript_269242 |
| Sequence | ATAATACCTTATAGTACAAATGCAGTAGGACACAGTAATTTCATTTACAACTCTAGTATGGAATTTTTCTTATTCAGAATAAGTATCAAAGATGGCAACA GTGACTGCTTCAAGCAACTTAGTCTCCAGAAATTCTCAGCTACATTATGCACCAGCTATCTTATATGAACCTAAAACTGCACCAATGAGACTTCGATATC AAAAGATCAATACTCATAATGGACTTAGAATTTTGAACATAATGGATGTACTGCGAAATAGAATACCAATCAATGTTAATTCAGCACAAGCTAGGAAGAA AAGACTTCAAAACAAGAATATCAGGCACACAGGCATCATCATATGTGGCATGAATTTGATCTTTGTGGGAACTGAGGTTGGTCCATGGAGCAAAACCGGA GGGTTAGGAGATGTTCTTGGAGGTCTGCCACCAGTTTTGGCAGGTAATGGGCATCGAGTTATGACAATATCTCCGCGTTATGATCAGTACAAAGATGCAT GGGATACAAGTGTTACAGTTGAGGTAAAAGTAGGAAATAGAACAGAAAAAGTTGGCTTCTTCCATTGCTATAAAAGAGGAGTTGATCGCGTCTTTGTGGA TCATCCACTATTCCTTGAAAAGGTCTGGGGGAAAAGTGGGACCAAACTTTATGGACCTTCTGCTGGAGATGATTACGAAGATAATCAACTACGTTTCAGC CTGTTCTGTCAGGCAGCTTTGCTTGCACCAAGGGTTCTGAATCTTAAGGAAAGTAAATATTTCTCAGGACCATATGGCGAAGATGTTATTTTCATTGCCA ATGATTGGCACACTGCTCTTCTCCCATGCTATTTGAAAACTTTGTACCAACCATTGGGCATCTTTAAGAATGCTCGAGTTGTATTTTGTATCCACAACAT TGCTTACCAAGGAAGATTTCCATTCGCTGACTTTTCACTTCTCAATCTCCCAGACCAATTTAAAAGTTCCTTTGATTTCATTGATGGGCATGTTAAACCG GTGATTGGAAGGAAAATCAATTGGATGAAAGCTGGAATTGTGGAATCACACCAAGTGTTAACTGTCAGTCCATACTATGCTGAAGAACTAGTGTCAGGCC CGGATAAAGGGGTTGAGTTGGACAACATTCTTCGCAAAACTGGTATTATTGGAATTGTGAATGGCATGGATGTTCAAGAGTGGAATCCATCAACTGATAA ATACATAACTGTCAAATACACTGCTACAACTGTATTGGAAGGAAAGGCTCTTTTGAAAGAAGCCCTCCAAGCCGAAGTTGGATTGCCGGTAGACAGAAAA ATTCCTCTCATTGGTTTCATCGGTAGGCTTGAAGAGCAAAAAGGTTCTGATATTCTTGTAGAAGCCATTCCTCAATTTATCAATGATGATGTTCAGATAG TAGCCCTTGGAACAGGAAAAAAACAAATGGAAAAGCAGCTTCAACAGCTTGAAGTAGCATACCCTGACAAGGCCAGAGGAGTGGCAAAATTCAATGTTCC CCTAGCACATATGATAATTGCTGGAGCTGATTTTATATTGATTCCTAGCAGATTTGAGCCTTGTGGTCTCATTCAGTTACAAGCTATGCGCTATGGAACC GTACCACTTGTTGCCTCAACTGGTGGACTAGTCGACACAGTTAAAGAAGGTTTCACTGGATTTCAGATGGGTGCCTTCAATGTCGAATGTGAAACTGTGG ATCCAGCTGATGTGGATGCTTTGGCTAAGACTGTCAAAAGGGCTCTTGTAGTTCATGGAACTCCAGCTTTTACAGAAATAATCCAGAATTGCATGGCTCA AGATCTTTCATGGAAGGAACCTGCTAAGAAGTGGGAGGAAGTGCTTCTAAGGTTGGGAGTTCCTGGTAGTGAAGCTGGAATTGATGGTGAAGAAATTGCT CCGCAGGCAAAGGAAAATGTGGCAACTCCATAATAATAACAAAACGTGAGGGAAGTTTCAGCTATACACTGAATTTGGTGAAGTTTCCAGCATAACACTT TTTATTATGTTTTAATTCTACTTCCATTTTTCGAGTATGAAAAGAGAGAACCTTACTTTTTTTATCACAAAAAAGGAGGCATGGAGAGAAGGGTAGTTCA TCATAGTAAAAGATTGATGGGTGGTTGCTATGAAGCACAGATACGGATACGTGTATCGGATACGATACGTATCTGATACGTCGACACGCATTTTTTCTAA A BLAST |
| Tissue | flowers |
| Gene name | LI_gene_54963; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_269242
| Blastp | Granule-bound starch synthase 1, chloroplastic/amyloplastic from Solanum with 71.87% of identity |
|---|---|
| Blastx | Granule-bound starch synthase 1, chloroplastic/amyloplastic from Solanum with 71.87% of identity |
| Eggnog | starch synthase activity(COG0297) |
| Kegg | - |
| CantataDB | Link to cantataDB annotations (CNT0001477) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019454627.1) |
| Pfam | Starch synthase catalytic domain (PF08323.10) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |